RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 LRRC3BQ96PB8 259 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 SLC22A12Q96S37 553 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 OSBPL6Q9BZF3 934 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 TLR8Q9NR97 1041 aaKnown RBP11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 SAMSN1Q9NSI8 373 aaKnown RBP11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 CNTN6Q9UQ52 1028 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 SCML2Q9UQR0 700 aa11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 MRPS17Q9Y2R5 130 aaKnown RBP11.25□□□□□ -0.61
CDC42SE1-206ENST00000492796 TRIOO75962 3097 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 O00370 1275 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 STK25O00506 426 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 MAN2B1O00754 1011 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 XPO1O14980 1071 aaKnown RBP11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 ABL1P00519 1130 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 TPM2P07951 284 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 SLC9A1P19634 815 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 PON1P27169 355 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 PSEN1P49768 467 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 KIF11P52732 1056 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 MYL5Q02045 173 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 TYRO3Q06418 890 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 MTF1Q14872 753 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 PDGFRLQ15198 375 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 KLHL40Q2TBA0 621 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 HSP90AA4PQ58FG1 418 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 RAB41Q5JT25 222 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 MIIPQ5JXC2 388 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 HECTD3Q5T447 861 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 IER5LQ5T953 404 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 CDKAL1Q5VV42 579 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 CAVIN1Q6NZI2 390 aaKnown RBP11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 LCLAT1Q6UWP7 414 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 GPRIN1Q7Z2K8 1008 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 CCDC186Q7Z3E2 898 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 TTC30AQ86WT1 665 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 DDX42Q86XP3 938 aaKnown RBP eCLIP11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 GPIHBP1Q8IV16 184 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 TMEM105Q8N8V8 129 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 PJA1Q8NG27 643 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 CYP2S1Q96SQ9 504 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 NELL2Q99435 816 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 FAM83CQ9BQN1 747 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 CRACR2AQ9BSW2 395 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 NAT10Q9H0A0 1025 aaKnown RBP11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 C8orf33Q9H7E9 229 aaPredicted RBP11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 UBE2TQ9NPD8 197 aaPredicted RBP11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 RTN4Q9NQC3 1192 aaKnown RBP11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 GMIPQ9P107 970 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 CHORDC1Q9UHD1 332 aaPredicted RBP11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 USP3Q9Y6I4 520 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 PIAS3Q9Y6X2 628 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 COL4A3Q01955 1670 aa11.24□□□□□ -0.61
CDC42SE1-206ENST00000492796 CYP26A1O43174 497 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 LETM1O95202 739 aaPredicted RBP11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 MBL2P11226 248 aaPredicted RBP11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 KRT5P13647 590 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 MAGEA9P43362 315 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 PLA2G4AP47712 749 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 CNGA2Q16280 664 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 MEA1Q16626 185 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 PIGZQ86VD9 579 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 ARHGAP18Q8N392 663 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 ANKRD20A12PQ8NF67 263 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 RIN3Q8TB24 985 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 SH3RF2Q8TEC5 729 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 OSCP1Q8WVF1 389 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 ZFYVE19Q96K21 471 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 CDK5RAP1Q96SZ6 601 aaKnown RBP11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 BPIFA3Q9BQP9 254 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 RNF38Q9H0F5 515 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 LTB4R2Q9NPC1 389 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 CYLDQ9NQC7 956 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 SIT1Q9Y3P8 196 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 CPQQ9Y646 472 aa11.23□□□□□ -0.61
CDC42SE1-206ENST00000492796 M0QYV0 167 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 RNF225M0QZC1 329 aaPredicted RBP11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 LEFTY2O00292 366 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 PES1O00541 588 aaKnown RBP11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 NCAM2O15394 837 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 COCHO43405 550 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 MED7O43513 233 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 TLR5O60602 858 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 IFNAR2P48551 515 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 KPNA1P52294 538 aaPredicted RBP11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 AMPD2Q01433 879 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 PDE4CQ08493 712 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 RUNX3Q13761 415 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 UBXN2BQ14CS0 331 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 KRT31Q15323 416 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 ITPRIPL2Q3MIP1 535 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 PKDCCQ504Y2 493 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 KLHDC10Q6PID8 442 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 TADA2BQ86TJ2 420 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 RALGPS2Q86X27 583 aaPredicted RBP11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 CCDC105Q8IYK2 499 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 CPA6Q8N4T0 437 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 ZNF276Q8N554 614 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 KCTD13Q8WZ19 329 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 TFAP2BQ92481 460 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms