RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 EFCAB12Q6NXP0 572 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 FOXR2Q6PJQ5 311 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 KRBA2Q6ZNG9 492 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 ZNF365Q70YC5 407 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 UBE3BQ7Z3V4 1068 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 FAM90A1Q86YD7 464 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 CMTM4Q8IZR5 234 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 SPARTQ8N0X7 666 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 FITM2Q8N6M3 262 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 SMOQ99835 787 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 PDCL3Q9H2J4 239 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 ZNF552Q9H707 407 aaPredicted RBP3.44□□□□□ -1.86
SNX13-209ENST00000492626 CNTD2Q9H8S5 307 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 ITM2CQ9NQX7 267 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 JKAMPQ9P055 326 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 SUFUQ9UMX1 484 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 GPR52Q9Y2T5 361 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 TCRBV7S2A1N4TA0A589 114 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 NT5C1B-RDH14C9J2C7 533 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 RFXAPO00287 272 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 PEX10O60683 326 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 ACTL6BO94805 426 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 NDST3O95803 873 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 PDIA3P30101 505 aaKnown RBP3.44□□□□□ -1.86
SNX13-209ENST00000492626 SLC11A2P49281 568 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 ARHGEF7Q14155 803 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 UTP14CQ5TAP6 766 aaKnown RBP3.44□□□□□ -1.86
SNX13-209ENST00000492626 DCAF12L1Q5VU92 463 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 FAM160B1Q5W0V3 765 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 RETSATQ6NUM9 610 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 USP30Q70CQ3 517 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 RASAL3Q86YV0 1011 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 ZDHHC14Q8IZN3 488 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 FAM46DQ8NEK8 389 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 WDR60Q8WVS4 1066 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 PHIPQ8WWQ0 1821 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 KCNN1Q92952 543 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 C3orf49Q96BT1 292 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 PHACTR3Q96KR7 559 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 RPAP1Q9BWH6 1393 aaPredicted RBP3.44□□□□□ -1.86
SNX13-209ENST00000492626 CHST8Q9H2A9 424 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 FAM83DQ9H4H8 585 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 RIC8AQ9NPQ8 531 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 MID2Q9UJV3 735 aa3.44□□□□□ -1.86
SNX13-209ENST00000492626 USP42Q9H9J4 1324 aaKnown RBP3.43□□□□□ -1.86
SNX13-209ENST00000492626 AQP12BA6NM10 295 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 FIBPO43427 364 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 MATN4O95460 622 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 IFIT1P09914 478 aaKnown RBP3.43□□□□□ -1.86
SNX13-209ENST00000492626 TXNP10599 105 aaKnown RBP3.43□□□□□ -1.86
SNX13-209ENST00000492626 RXRAP19793 462 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 FPR1P21462 350 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 GUCY1A2P33402 732 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 SERPINF1P36955 418 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 CTBP1Q13363 440 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 PTK2BQ14289 1009 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 P3H1Q32P28 736 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 PREPLQ4J6C6 727 aaPredicted RBP3.43□□□□□ -1.86
SNX13-209ENST00000492626 LCE2AQ5TA79 106 aaPredicted RBP3.43□□□□□ -1.86
SNX13-209ENST00000492626 CST9Q5W186 159 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 MFSD5Q6N075 450 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 SEM1Q6ZVN7 128 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.43□□□□□ -1.86
SNX13-209ENST00000492626 NME8Q8N427 588 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 RNF152Q8N8N0 203 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 IL17RDQ8NFM7 739 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 JMJD4Q9H9V9 463 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 PDP2Q9P2J9 529 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 BAG5Q9UL15 447 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 ARHGAP26Q9UNA1 814 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 RRP7AQ9Y3A4 280 aaKnown RBP3.43□□□□□ -1.86
SNX13-209ENST00000492626 EFEMP2O95967 443 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 MGAT1P26572 445 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 PCSK1P29120 753 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 PRKAR1BP31321 381 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 AKT1P31749 480 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 THBS2P35442 1172 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 UBXN2AP68543 259 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 MAPK7Q13164 816 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 FBXO47Q5MNV8 452 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 ATXN7L2Q5T6C5 722 aaPredicted RBP3.43□□□□□ -1.86
SNX13-209ENST00000492626 MRNIPQ6NTE8 343 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 LVRNQ6Q4G3 990 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 Q6ZUG5 572 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 RASGRP3Q8IV61 690 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 CYP2W1Q8TAV3 490 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 UCMAQ8WVF2 138 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 CPT1BQ92523 772 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 HOXB13Q92826 284 aaPredicted RBP3.43□□□□□ -1.86
SNX13-209ENST00000492626 NUDT16L1Q9BRJ7 211 aaKnown RBP3.43□□□□□ -1.86
SNX13-209ENST00000492626 PCDHAC1Q9H158 963 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 GSTO2Q9H4Y5 243 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 NOD2Q9HC29 1040 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 GBA2Q9HCG7 927 aaPredicted RBP3.43□□□□□ -1.86
SNX13-209ENST00000492626 RGL1Q9NZL6 768 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 XPR1Q9UBH6 696 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 CA14Q9ULX7 337 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 MGAMO43451 1857 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 PLEKHH1Q9ULM0 1364 aa3.43□□□□□ -1.86
SNX13-209ENST00000492626 TEX51A0A1B0GUA7 166 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms