RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 CILPO75339 1184 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 OLFM2O95897 454 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 OAS1P00973 400 aaKnown RBP12.49□□□□□ -0.41
MDC1-207ENST00000492462 YWHAQP27348 245 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 MAGEA9P43362 315 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 STX17P56962 302 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 SATB1Q01826 763 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 PUM1Q14671 1186 aaKnown RBP eCLIP12.49□□□□□ -0.41
MDC1-207ENST00000492462 EML3Q32P44 896 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 ZNF394Q53GI3 561 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 TTI2Q6NXR4 508 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 CC2D1AQ6P1N0 951 aaPredicted RBP12.49□□□□□ -0.41
MDC1-207ENST00000492462 CLEC20AQ6ZU45 233 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 FBXO32Q969P5 355 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 SLC35C1Q96A29 364 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 JAKMIP2Q96AA8 810 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 DHTKD1Q96HY7 919 aaPredicted RBP12.49□□□□□ -0.41
MDC1-207ENST00000492462 SLITRK1Q96PX8 696 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 HNRNPABQ99729 332 aaKnown RBP12.49□□□□□ -0.41
MDC1-207ENST00000492462 NT5C1AQ9BXI3 368 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 PRMT8Q9NR22 394 aaPredicted RBP12.49□□□□□ -0.41
MDC1-207ENST00000492462 DUS2Q9NX74 493 aaKnown RBP12.49□□□□□ -0.41
MDC1-207ENST00000492462 CHMP5Q9NZZ3 219 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 GMIPQ9P107 970 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 FBXO4Q9UKT5 387 aa12.49□□□□□ -0.41
MDC1-207ENST00000492462 HHLA1C9JL84 531 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 LEFTY2O00292 366 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 RTN3O95197 1032 aaPredicted RBP12.48□□□□□ -0.41
MDC1-207ENST00000492462 TDGF1P13385 188 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 GJA4P35212 333 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 IFNAR2P48551 515 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 SLC7A9P82251 487 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 CCINQ13939 588 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 PDGFRLQ15198 375 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 CAMK4Q16566 473 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 FSTL4Q6MZW2 842 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 PKN3Q6P5Z2 889 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 SLC4A11Q8NBS3 891 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 CCDC150Q8NCX0 1101 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 OSCP1Q8WVF1 389 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 NELFBQ8WX92 580 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 WBP2Q969T9 261 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 CYFIP2Q96F07 1278 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 MSANTD3Q96H12 275 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 CCSER2Q9H7U1 834 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 ECT2Q9H8V3 914 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 CSNK1G1Q9HCP0 422 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 CISHQ9NSE2 258 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 EHD2Q9NZN4 543 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 ARMCX3Q9UH62 379 aaPredicted RBP12.48□□□□□ -0.41
MDC1-207ENST00000492462 CTNND2Q9UQB3 1225 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 COQ4Q9Y3A0 265 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 CPQQ9Y646 472 aa12.48□□□□□ -0.41
MDC1-207ENST00000492462 FAM92AA1XBS5 289 aa12.47□□□□□ -0.41
MDC1-207ENST00000492462 COCHO43405 550 aa12.47□□□□□ -0.41
MDC1-207ENST00000492462 STX10O60499 249 aa12.47□□□□□ -0.41
MDC1-207ENST00000492462 ZDHHC11BP0C7U3 371 aa12.47□□□□□ -0.41
MDC1-207ENST00000492462 FAM200BP0CF97 657 aa12.47□□□□□ -0.41
MDC1-207ENST00000492462 MBL2P11226 248 aaPredicted RBP12.47□□□□□ -0.41
MDC1-207ENST00000492462 TCF3P15923 654 aa12.47□□□□□ -0.41
MDC1-207ENST00000492462 PPP3CCP48454 512 aa12.47□□□□□ -0.41
MDC1-207ENST00000492462 GALK1P51570 392 aa12.47□□□□□ -0.41
MDC1-207ENST00000492462 RAD23BP54727 409 aa12.47□□□□□ -0.41
MDC1-207ENST00000492462 LRMPQ12912 555 aa12.47□□□□□ -0.41
MDC1-207ENST00000492462 STIM1Q13586 685 aa12.47□□□□□ -0.41
MDC1-207ENST00000492462 GAB4Q2WGN9 574 aa12.47□□□□□ -0.41
MDC1-207ENST00000492462 ZNF528Q3MIS6 628 aa12.47□□□□□ -0.41
MDC1-207ENST00000492462 TMEM196Q5HYL7 178 aa12.47□□□□□ -0.41
MDC1-207ENST00000492462 PPP1R26Q5T8A7 1209 aaPredicted RBP12.47□□□□□ -0.41
MDC1-207ENST00000492462 EZH1Q92800 747 aaPredicted RBP12.47□□□□□ -0.41
MDC1-207ENST00000492462 NELL1Q92832 810 aa12.47□□□□□ -0.41
MDC1-207ENST00000492462 ZFRQ96KR1 1074 aaKnown RBP12.47□□□□□ -0.41
MDC1-207ENST00000492462 POLR3BQ9NW08 1133 aaPredicted RBP12.47□□□□□ -0.41
MDC1-207ENST00000492462 CFAP97Q9P2B7 532 aa12.47□□□□□ -0.41
MDC1-207ENST00000492462 ANTXRLA6NF34 631 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 TRDMT1O14717 391 aaKnown RBP12.46□□□□□ -0.41
MDC1-207ENST00000492462 CYP26A1O43174 497 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 EGFP01133 1207 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 PFKLP17858 780 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 FMO5P49326 533 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 UBE2HP62256 183 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 DMWDQ09019 674 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 LRRC32Q14392 662 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 CCDC40Q4G0X9 1142 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 DGKKQ5KSL6 1271 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 C1orf228Q6PIY5 440 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 MAMSTRQ6ZN01 415 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 FILIP1Q7Z7B0 1213 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 CPA6Q8N4T0 437 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 ZBTB44Q8NCP5 570 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 PDZD8Q8NEN9 1154 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 OVCA2Q8WZ82 227 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 HEXIM2Q96MH2 286 aaKnown RBP12.46□□□□□ -0.41
MDC1-207ENST00000492462 CEP63Q96MT8 703 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 GTPBP4Q9BZE4 634 aaKnown RBP12.46□□□□□ -0.41
MDC1-207ENST00000492462 NMUR1Q9HB89 426 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 OSER1Q9NX31 292 aa12.46□□□□□ -0.41
MDC1-207ENST00000492462 KIAA1549LQ6ZVL6 1849 aa12.46□□□□□ -0.42
MDC1-207ENST00000492462 SDK1Q7Z5N4 2213 aa12.45□□□□□ -0.42
MDC1-207ENST00000492462 TBX18O95935 607 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms