RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 CHRNB1P11230 501 aa26.09■■□□□ 1.77
UPF3A-209ENST00000492270 TCF3P15923 654 aa26.09■■□□□ 1.77
UPF3A-209ENST00000492270 MARSP56192 900 aaKnown RBP26.09■■□□□ 1.77
UPF3A-209ENST00000492270 UBR7Q8N806 425 aa26.09■■□□□ 1.77
UPF3A-209ENST00000492270 LMO3Q8TAP4 145 aa26.09■■□□□ 1.77
UPF3A-209ENST00000492270 OSCP1Q8WVF1 389 aa26.09■■□□□ 1.77
UPF3A-209ENST00000492270 CCSER2Q9H7U1 834 aa26.09■■□□□ 1.77
UPF3A-209ENST00000492270 COMMD8Q9NX08 183 aa26.09■■□□□ 1.77
UPF3A-209ENST00000492270 DUS2Q9NX74 493 aaKnown RBP26.09■■□□□ 1.77
UPF3A-209ENST00000492270 PIEZO1Q92508 2521 aa26.08■■□□□ 1.77
UPF3A-209ENST00000492270 SCAMP3O14828 347 aaKnown RBP26.08■■□□□ 1.77
UPF3A-209ENST00000492270 PMM2O15305 246 aa26.08■■□□□ 1.77
UPF3A-209ENST00000492270 COCHO43405 550 aa26.08■■□□□ 1.77
UPF3A-209ENST00000492270 GNA14O95837 355 aa26.08■■□□□ 1.77
UPF3A-209ENST00000492270 ZDHHC11BP0C7U3 371 aa26.08■■□□□ 1.77
UPF3A-209ENST00000492270 MBL2P11226 248 aaPredicted RBP26.08■■□□□ 1.77
UPF3A-209ENST00000492270 NBL1P41271 181 aa26.08■■□□□ 1.77
UPF3A-209ENST00000492270 IFNAR2P48551 515 aa26.08■■□□□ 1.77
UPF3A-209ENST00000492270 KCNH2Q12809 1159 aa26.08■■□□□ 1.77
UPF3A-209ENST00000492270 MTAPQ13126 283 aa26.08■■□□□ 1.77
UPF3A-209ENST00000492270 PDGFRLQ15198 375 aa26.08■■□□□ 1.77
UPF3A-209ENST00000492270 EML3Q32P44 896 aa26.08■■□□□ 1.77
UPF3A-209ENST00000492270 KAT5Q92993 513 aa26.08■■□□□ 1.77
UPF3A-209ENST00000492270 DUSP16Q9BY84 665 aa26.08■■□□□ 1.77
UPF3A-209ENST00000492270 NUP62CLQ9H1M0 184 aa26.08■■□□□ 1.77
UPF3A-209ENST00000492270 LINC00597Q9H2U6 94 aa26.08■■□□□ 1.77
UPF3A-209ENST00000492270 CHRDQ9H2X0 955 aa26.08■■□□□ 1.77
UPF3A-209ENST00000492270 CYP26A1O43174 497 aa26.07■■□□□ 1.76
UPF3A-209ENST00000492270 SP9P0CG40 484 aa26.07■■□□□ 1.76
UPF3A-209ENST00000492270 ACO1P21399 889 aaKnown RBP26.07■■□□□ 1.76
UPF3A-209ENST00000492270 SNX30Q5VWJ9 437 aa26.07■■□□□ 1.76
UPF3A-209ENST00000492270 C1orf228Q6PIY5 440 aa26.07■■□□□ 1.76
UPF3A-209ENST00000492270 NT5C1BQ96P26 610 aa26.07■■□□□ 1.76
UPF3A-209ENST00000492270 DNAI2Q9GZS0 605 aa26.07■■□□□ 1.76
UPF3A-209ENST00000492270 FBXO44Q9H4M3 255 aa26.07■■□□□ 1.76
UPF3A-209ENST00000492270 FAM124BQ9H5Z6 455 aaPredicted RBP26.07■■□□□ 1.76
UPF3A-209ENST00000492270 LAMTOR5O43504 91 aa26.06■■□□□ 1.76
UPF3A-209ENST00000492270 HECTD3Q5T447 861 aa26.06■■□□□ 1.76
UPF3A-209ENST00000492270 ARHGAP17Q68EM7 881 aa26.06■■□□□ 1.76
UPF3A-209ENST00000492270 NAIF1Q69YI7 327 aaPredicted RBP26.06■■□□□ 1.76
UPF3A-209ENST00000492270 CNOT6LQ96LI5 555 aaKnown RBP26.06■■□□□ 1.76
UPF3A-209ENST00000492270 ECT2Q9H8V3 914 aa26.06■■□□□ 1.76
UPF3A-209ENST00000492270 PNPLA8Q9NP80 782 aa26.06■■□□□ 1.76
UPF3A-209ENST00000492270 CFAP97Q9P2B7 532 aa26.06■■□□□ 1.76
UPF3A-209ENST00000492270 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.06■■□□□ 1.76
UPF3A-209ENST00000492270 P4HA2O15460 535 aa26.05■■□□□ 1.76
UPF3A-209ENST00000492270 AFPP02771 609 aaKnown RBP26.05■■□□□ 1.76
UPF3A-209ENST00000492270 CCDC192P0DO97 292 aa26.05■■□□□ 1.76
UPF3A-209ENST00000492270 TBXAS1P24557 533 aaPredicted RBP26.05■■□□□ 1.76
UPF3A-209ENST00000492270 GAS6Q14393 721 aa26.05■■□□□ 1.76
UPF3A-209ENST00000492270 DPCR1Q3MIW9 517 aa26.05■■□□□ 1.76
UPF3A-209ENST00000492270 Q6ZS52 159 aa26.05■■□□□ 1.76
UPF3A-209ENST00000492270 ARHGEF19Q8IW93 802 aa26.05■■□□□ 1.76
UPF3A-209ENST00000492270 PPM1KQ8N3J5 372 aa26.05■■□□□ 1.76
UPF3A-209ENST00000492270 MLKLQ8NB16 471 aa26.05■■□□□ 1.76
UPF3A-209ENST00000492270 ATP2A3Q93084 1043 aa26.05■■□□□ 1.76
UPF3A-209ENST00000492270 ZFRQ96KR1 1074 aaKnown RBP26.05■■□□□ 1.76
UPF3A-209ENST00000492270 OSER1Q9NX31 292 aa26.05■■□□□ 1.76
UPF3A-209ENST00000492270 SCML2Q9UQR0 700 aa26.05■■□□□ 1.76
UPF3A-209ENST00000492270 R4GN57 208 aa26.05■■□□□ 1.76
UPF3A-209ENST00000492270 GJA4P35212 333 aa26.04■■□□□ 1.76
UPF3A-209ENST00000492270 TUBP50607 506 aa26.04■■□□□ 1.76
UPF3A-209ENST00000492270 YWHAEP62258 255 aaKnown RBP26.04■■□□□ 1.76
UPF3A-209ENST00000492270 GOLGA7BQ2TAP0 167 aa26.04■■□□□ 1.76
UPF3A-209ENST00000492270 TSSK4Q6SA08 328 aa26.04■■□□□ 1.76
UPF3A-209ENST00000492270 TTC30AQ86WT1 665 aa26.04■■□□□ 1.76
UPF3A-209ENST00000492270 CPA6Q8N4T0 437 aa26.04■■□□□ 1.76
UPF3A-209ENST00000492270 NMUR1Q9HB89 426 aa26.04■■□□□ 1.76
UPF3A-209ENST00000492270 FGFR1OPO95684 399 aaKnown RBP26.03■■□□□ 1.76
UPF3A-209ENST00000492270 CD19P15391 556 aa26.03■■□□□ 1.76
UPF3A-209ENST00000492270 KIF11P52732 1056 aa26.03■■□□□ 1.76
UPF3A-209ENST00000492270 CSTF1Q05048 431 aaKnown RBP26.03■■□□□ 1.76
UPF3A-209ENST00000492270 CETN1Q12798 172 aa26.03■■□□□ 1.76
UPF3A-209ENST00000492270 CCINQ13939 588 aa26.03■■□□□ 1.76
UPF3A-209ENST00000492270 LRRC32Q14392 662 aa26.03■■□□□ 1.76
UPF3A-209ENST00000492270 TMEM270Q6UE05 265 aa26.03■■□□□ 1.76
UPF3A-209ENST00000492270 RRAGAQ7L523 313 aa26.03■■□□□ 1.76
UPF3A-209ENST00000492270 IRF2BP1Q8IU81 584 aa26.03■■□□□ 1.76
UPF3A-209ENST00000492270 CREBRFQ8IUR6 639 aa26.03■■□□□ 1.76
UPF3A-209ENST00000492270 EHBP1Q8NDI1 1231 aa26.03■■□□□ 1.76
UPF3A-209ENST00000492270 IPO9Q96P70 1041 aaKnown RBP26.03■■□□□ 1.76
UPF3A-209ENST00000492270 FBRSL1Q9HCM7 1045 aaKnown RBP26.03■■□□□ 1.76
UPF3A-209ENST00000492270 PRMT8Q9NR22 394 aaPredicted RBP26.03■■□□□ 1.76
UPF3A-209ENST00000492270 TLR8Q9NR97 1041 aaKnown RBP26.03■■□□□ 1.76
UPF3A-209ENST00000492270 TSPAN16Q9UKR8 245 aa26.03■■□□□ 1.76
UPF3A-209ENST00000492270 A0A1W2PQH9 124 aa26.02■■□□□ 1.76
UPF3A-209ENST00000492270 PROB1E7EW31 1015 aa26.02■■□□□ 1.76
UPF3A-209ENST00000492270 TLR5O60602 858 aa26.02■■□□□ 1.76
UPF3A-209ENST00000492270 TBX18O95935 607 aa26.02■■□□□ 1.76
UPF3A-209ENST00000492270 CALCAP01258 141 aa26.02■■□□□ 1.76
UPF3A-209ENST00000492270 SGO2Q562F6 1265 aa26.02■■□□□ 1.76
UPF3A-209ENST00000492270 FSTL4Q6MZW2 842 aa26.02■■□□□ 1.76
UPF3A-209ENST00000492270 GPT2Q8TD30 523 aa26.02■■□□□ 1.76
UPF3A-209ENST00000492270 WBP2Q969T9 261 aa26.02■■□□□ 1.76
UPF3A-209ENST00000492270 GBP4Q96PP9 640 aa26.02■■□□□ 1.76
UPF3A-209ENST00000492270 INTS2Q9H0H0 1204 aaKnown RBP26.02■■□□□ 1.76
UPF3A-209ENST00000492270 FBXO4Q9UKT5 387 aa26.02■■□□□ 1.76
UPF3A-209ENST00000492270 PCDHB4Q9Y5E5 795 aa26.02■■□□□ 1.76
UPF3A-209ENST00000492270 ZFHX2Q9C0A1 2572 aaPredicted RBP26.02■■□□□ 1.76
UPF3A-209ENST00000492270 RNF225M0QZC1 329 aaPredicted RBP26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms