RNA–Protein interactions for RNA: ENST00000491857.1

PSMD4-212, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 461 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-212ENST00000491857 C12orf40Q86WS4 652 aa18.03■□□□□ 0.48
PSMD4-212ENST00000491857 CCDC65Q8IXS2 484 aa18.03■□□□□ 0.48
PSMD4-212ENST00000491857 HDDC3Q8N4P3 179 aa18.03■□□□□ 0.48
PSMD4-212ENST00000491857 PDZD8Q8NEN9 1154 aa18.03■□□□□ 0.48
PSMD4-212ENST00000491857 KCNV2Q8TDN2 545 aa18.03■□□□□ 0.48
PSMD4-212ENST00000491857 FGFBP2Q9BYJ0 223 aa18.03■□□□□ 0.48
PSMD4-212ENST00000491857 TMEM74BQ9NUR3 256 aa18.03■□□□□ 0.48
PSMD4-212ENST00000491857 MBD1Q9UIS9 605 aaPredicted RBP18.03■□□□□ 0.48
PSMD4-212ENST00000491857 CLIC4Q9Y696 253 aa18.03■□□□□ 0.48
PSMD4-212ENST00000491857 ADAMTS9Q9P2N4 1935 aa18.03■□□□□ 0.48
PSMD4-212ENST00000491857 AKAP13Q12802 2813 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 VPS37CA5D8V6 355 aaPredicted RBP18.02■□□□□ 0.48
PSMD4-212ENST00000491857 SRRM3A6NNA2 597 aaPredicted RBP18.02■□□□□ 0.48
PSMD4-212ENST00000491857 UPK3BL1B0FP48 263 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 UPK3BL2E5RIL1 263 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 SCAMP3O14828 347 aaKnown RBP18.02■□□□□ 0.48
PSMD4-212ENST00000491857 TACC1O75410 805 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 CD2BP2O95400 341 aaKnown RBP18.02■□□□□ 0.48
PSMD4-212ENST00000491857 CFIP05156 583 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 FAM163BP0C2L3 166 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 CHRM1P11229 460 aaPredicted RBP18.02■□□□□ 0.48
PSMD4-212ENST00000491857 MESP2Q0VG99 397 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 IFRD2Q12894 506 aaPredicted RBP18.02■□□□□ 0.48
PSMD4-212ENST00000491857 BTBD8Q5XKL5 378 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 KIAA1211LQ6NV74 962 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 SLC36A4Q6YBV0 504 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 TRAPPC11Q7Z392 1133 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 CBWD2Q8IUF1 395 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 SFTPA1Q8IWL2 248 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 WDFY3Q8IZQ1 3526 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 FRMD1Q8N878 549 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 OR6B3Q8NGW1 331 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 OVCA2Q8WZ82 227 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 PILRBQ9UKJ0 227 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 SLC6A14Q9UN76 642 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 MSRB2Q9Y3D2 182 aa18.02■□□□□ 0.48
PSMD4-212ENST00000491857 ATXN2Q99700 1313 aaKnown RBP18.01■□□□□ 0.47
PSMD4-212ENST00000491857 SPEGQ15772 3267 aa18.01■□□□□ 0.47
PSMD4-212ENST00000491857 TBC1D3BA6NDS4 549 aa18.01■□□□□ 0.47
PSMD4-212ENST00000491857 H0Y626 953 aa18.01■□□□□ 0.47
PSMD4-212ENST00000491857 HYAL3O43820 417 aaPredicted RBP18.01■□□□□ 0.47
PSMD4-212ENST00000491857 ADAM23O75077 832 aa18.01■□□□□ 0.47
PSMD4-212ENST00000491857 RTN3O95197 1032 aaPredicted RBP18.01■□□□□ 0.47
PSMD4-212ENST00000491857 TRIM16O95361 564 aa18.01■□□□□ 0.47
PSMD4-212ENST00000491857 YWHAQP27348 245 aa18.01■□□□□ 0.47
PSMD4-212ENST00000491857 TNNC1P63316 161 aa18.01■□□□□ 0.47
PSMD4-212ENST00000491857 SIM1P81133 766 aaPredicted RBP18.01■□□□□ 0.47
PSMD4-212ENST00000491857 GFPT1Q06210 699 aaPredicted RBP18.01■□□□□ 0.47
PSMD4-212ENST00000491857 SEMA3BQ13214 749 aa18.01■□□□□ 0.47
PSMD4-212ENST00000491857 DUOXA1Q1HG43 343 aa18.01■□□□□ 0.47
PSMD4-212ENST00000491857 LY6G5CQ5SRR4 150 aa18.01■□□□□ 0.47
PSMD4-212ENST00000491857 EMC10Q5UCC4 262 aa18.01■□□□□ 0.47
PSMD4-212ENST00000491857 NUP93Q8N1F7 819 aa18.01■□□□□ 0.47
PSMD4-212ENST00000491857 CLIC6Q96NY7 704 aa18.01■□□□□ 0.47
PSMD4-212ENST00000491857 MRPL45Q9BRJ2 306 aaKnown RBP18.01■□□□□ 0.47
PSMD4-212ENST00000491857 HSPBP1Q9NZL4 362 aa18.01■□□□□ 0.47
PSMD4-212ENST00000491857 SH3BP1Q9Y3L3 701 aa18.01■□□□□ 0.47
PSMD4-212ENST00000491857 ZBTB24O43167 697 aaPredicted RBP18■□□□□ 0.47
PSMD4-212ENST00000491857 PTPN1P18031 435 aaKnown RBP18■□□□□ 0.47
PSMD4-212ENST00000491857 PDCP20941 246 aa18■□□□□ 0.47
PSMD4-212ENST00000491857 ITPKAP23677 461 aa18■□□□□ 0.47
PSMD4-212ENST00000491857 RPL6Q02878 288 aaKnown RBP18■□□□□ 0.47
PSMD4-212ENST00000491857 COL9A2Q14055 689 aaPredicted RBP18■□□□□ 0.47
PSMD4-212ENST00000491857 PIP4P1Q86T03 277 aa18■□□□□ 0.47
PSMD4-212ENST00000491857 ZNF513Q8N8E2 541 aaPredicted RBP18■□□□□ 0.47
PSMD4-212ENST00000491857 FBXO32Q969P5 355 aa18■□□□□ 0.47
PSMD4-212ENST00000491857 GTPBP2Q9BX10 602 aaKnown RBP18■□□□□ 0.47
PSMD4-212ENST00000491857 LRRC27Q9C0I9 530 aa18■□□□□ 0.47
PSMD4-212ENST00000491857 ZDHHC4Q9NPG8 344 aa18■□□□□ 0.47
PSMD4-212ENST00000491857 DEC1Q9P2X7 70 aa18■□□□□ 0.47
PSMD4-212ENST00000491857 ATP8B3O60423 1300 aa17.99■□□□□ 0.47
PSMD4-212ENST00000491857 HOXC11O43248 304 aaPredicted RBP17.99■□□□□ 0.47
PSMD4-212ENST00000491857 OPHN1O60890 802 aa17.99■□□□□ 0.47
PSMD4-212ENST00000491857 SERPINF2P08697 491 aa17.99■□□□□ 0.47
PSMD4-212ENST00000491857 DLATP10515 647 aaKnown RBP17.99■□□□□ 0.47
PSMD4-212ENST00000491857 TNNI1P19237 187 aa17.99■□□□□ 0.47
PSMD4-212ENST00000491857 HNRNPDQ14103 355 aaKnown RBP17.99■□□□□ 0.47
PSMD4-212ENST00000491857 WDR72Q3MJ13 1102 aa17.99■□□□□ 0.47
PSMD4-212ENST00000491857 HECTD3Q5T447 861 aa17.99■□□□□ 0.47
PSMD4-212ENST00000491857 ETFBKMTQ8IXQ9 262 aa17.99■□□□□ 0.47
PSMD4-212ENST00000491857 PHTF2Q8N3S3 785 aa17.99■□□□□ 0.47
PSMD4-212ENST00000491857 B3GALNT2Q8NCR0 500 aa17.99■□□□□ 0.47
PSMD4-212ENST00000491857 CGRRF1Q99675 332 aa17.99■□□□□ 0.47
PSMD4-212ENST00000491857 DUSP9Q99956 384 aaKnown RBP17.99■□□□□ 0.47
PSMD4-212ENST00000491857 ZNF518BQ9C0D4 1074 aa17.99■□□□□ 0.47
PSMD4-212ENST00000491857 UPF2Q9HAU5 1272 aaKnown RBP17.99■□□□□ 0.47
PSMD4-212ENST00000491857 PCDH15Q96QU1 1955 aa17.99■□□□□ 0.47
PSMD4-212ENST00000491857 SPAARA0A1B0GVQ0 90 aa17.98■□□□□ 0.47
PSMD4-212ENST00000491857 A8MXQ7 604 aa17.98■□□□□ 0.47
PSMD4-212ENST00000491857 EIF3DO15371 548 aaKnown RBP eCLIP17.98■□□□□ 0.47
PSMD4-212ENST00000491857 COCHO43405 550 aa17.98■□□□□ 0.47
PSMD4-212ENST00000491857 TULP3O75386 442 aa17.98■□□□□ 0.47
PSMD4-212ENST00000491857 HOXB2P14652 356 aa17.98■□□□□ 0.47
PSMD4-212ENST00000491857 TUBP50607 506 aa17.98■□□□□ 0.47
PSMD4-212ENST00000491857 CACNA2D1P54289 1103 aa17.98■□□□□ 0.47
PSMD4-212ENST00000491857 ZNF33AQ06730 810 aa17.98■□□□□ 0.47
PSMD4-212ENST00000491857 TRPC3Q13507 836 aa17.98■□□□□ 0.47
PSMD4-212ENST00000491857 SNRNP35Q16560 246 aaKnown RBP17.98■□□□□ 0.47
PSMD4-212ENST00000491857 C10orf76Q5T2E6 689 aa17.98■□□□□ 0.47
PSMD4-212ENST00000491857 NAT16Q8N8M0 369 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms