RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 CPA6Q8N4T0 437 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 GPR161Q8N6U8 529 aaKnown RBP10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 SMARCD1Q96GM5 515 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 TIGD1Q96MW7 591 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 SLITRK1Q96PX8 696 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 GSDMAQ96QA5 445 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 HNRNPABQ99729 332 aaKnown RBP10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 SMOQ99835 787 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 P2RY13Q9BPV8 354 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 FAM124BQ9H5Z6 455 aaPredicted RBP10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 TRPC7Q9HCX4 862 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 DMAP1Q9NPF5 467 aaPredicted RBP10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 DLL3Q9NYJ7 618 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 SMG5Q9UPR3 1016 aaKnown RBP10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 WNT6Q9Y6F9 365 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 FRYLO94915 3013 aa10.32□□□□□ -0.76
TMEM39A-210ENST00000490099 HHLA1C9JL84 531 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 ATG13O75143 517 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 HOXC13P31276 330 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 OPRD1P41143 372 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 PRCPP42785 496 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 ID4P47928 161 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 GCLMP48507 274 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 FNTBP49356 437 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 PGFP49763 221 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 NUCB2P80303 420 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 FOXK2Q01167 660 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 SPOPLQ6IQ16 392 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 ERMP1Q7Z2K6 904 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 FAM186BQ8IYM0 893 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 ZNF276Q8N554 614 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 CAMKK1Q8N5S9 505 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 C12orf29Q8N999 325 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 PDZD8Q8NEN9 1154 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 SCAMP5Q8TAC9 235 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 RMDN1Q96DB5 314 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 TWNKQ96RR1 684 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 TMEM8AQ9HCN3 771 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 HMGXB4Q9UGU5 601 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 CHORDC1Q9UHD1 332 aaPredicted RBP10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 COQ4Q9Y3A0 265 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 DCHS1Q96JQ0 3298 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 ATP8B3O60423 1300 aa10.31□□□□□ -0.76
TMEM39A-210ENST00000490099 SDK1Q7Z5N4 2213 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 E2F8A0AVK6 867 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 SLC9A3R1O14745 358 aaPredicted RBP10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 COCHO43405 550 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 GREM1O60565 184 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 LRP3O75074 770 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 CILPO75339 1184 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 NFATC1O95644 943 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 TRIM49P0CI25 452 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 TRIM49CP0CI26 452 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 EIF2DP41214 584 aaKnown RBP10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 IFNAR2P48551 515 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 SLC5A3P53794 718 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 NR1H3Q13133 447 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 PNOCQ13519 176 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 HECTD3Q5T447 861 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 ZNF658Q5TYW1 1059 aaPredicted RBP10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 KRT39Q6A163 491 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 LAIR1Q6GTX8 287 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 RHBDF2Q6PJF5 856 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 SYT13Q7L8C5 426 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 KIAA2013Q8IYS2 634 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 SLC2A14Q8TDB8 520 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 SEMA4DQ92854 862 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 CD101Q93033 1021 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 EXOC4Q96A65 974 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 CCDC34Q96HJ3 373 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 IPO9Q96P70 1041 aaKnown RBP10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 GTPBP4Q9BZE4 634 aaKnown RBP10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 NIF3L1Q9GZT8 377 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 PNPLA8Q9NP80 782 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 PARD6AQ9NPB6 346 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 CYLDQ9NQC7 956 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 KRT82Q9NSB4 513 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 RMND1Q9NWS8 449 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 SCML2Q9UQR0 700 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 PCDHA5Q9Y5H7 936 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 CPQQ9Y646 472 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 ATG2BQ96BY7 2078 aa10.3□□□□□ -0.76
TMEM39A-210ENST00000490099 DMXL1Q9Y485 3027 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 K7EQS6 105 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 CETN3O15182 167 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 RNF40O75150 1001 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 AP1G2O75843 785 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 CYP17A1P05093 508 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 RETP07949 1114 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 KRT13P13646 458 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 CCDC130P13994 396 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 PIK3CAP42336 1068 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 PMS1P54277 932 aaKnown RBP10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 SIM2Q14190 667 aaPredicted RBP10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 DHCR24Q15392 516 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 ANKRD40Q6AI12 368 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 KLHDC10Q6PID8 442 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 FOXR2Q6PJQ5 311 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 SCARA5Q6ZMJ2 495 aa10.29□□□□□ -0.76
TMEM39A-210ENST00000490099 CLEC20AQ6ZU45 233 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms