RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 NTSR1P30989 418 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 KRT2P35908 639 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 EIF2DP41214 584 aaKnown RBP7.85□□□□□ -1.15
COL9A1-209ENST00000489861 CCT8P50990 548 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 YARSP54577 528 aaKnown RBP7.85□□□□□ -1.15
COL9A1-209ENST00000489861 RESTQ13127 1097 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 ORC2Q13416 577 aaPredicted RBP7.85□□□□□ -1.15
COL9A1-209ENST00000489861 SAFBQ15424 915 aaKnown RBP eCLIP7.85□□□□□ -1.15
COL9A1-209ENST00000489861 LCE2DQ5TA82 110 aaPredicted RBP7.85□□□□□ -1.15
COL9A1-209ENST00000489861 EGFLAMQ63HQ2 1017 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 NCAPH2Q6IBW4 605 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 ARMCX5Q6P1M9 558 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 FILIP1Q7Z7B0 1213 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 GATAD2AQ86YP4 633 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 DCBLD1Q8N8Z6 715 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 ENGASEQ8NFI3 743 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 PIGOQ8TEQ8 1089 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 IGSF8Q969P0 613 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 CNDP2Q96KP4 475 aaKnown RBP7.85□□□□□ -1.15
COL9A1-209ENST00000489861 CCDC94Q9BW85 323 aaPredicted RBP7.85□□□□□ -1.15
COL9A1-209ENST00000489861 ZCWPW1Q9H0M4 648 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 TOPORSQ9NS56 1045 aaPredicted RBP7.85□□□□□ -1.15
COL9A1-209ENST00000489861 ANKEF1Q9NU02 776 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 ANKRD6Q9Y2G4 727 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 PCDHB1Q9Y5F3 818 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 RAD54BQ9Y620 910 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 ADGRG4Q8IZF6 3080 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 HIVEP1P15822 2718 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 LRRK1Q38SD2 2015 aa7.85□□□□□ -1.15
COL9A1-209ENST00000489861 SVILO95425 2214 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 PHLPP2Q6ZVD8 1323 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 TDRD6O60522 2096 aaKnown RBP7.84□□□□□ -1.15
COL9A1-209ENST00000489861 TRAV19A0A0A6YYK7 116 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 E2F8A0AVK6 867 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 TBC1D3BA6NDS4 549 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 PPEF2O14830 753 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 TRIM24O15164 1050 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 PAPSS1O43252 624 aaPredicted RBP7.84□□□□□ -1.15
COL9A1-209ENST00000489861 TRAK2O60296 914 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 LYPLA2O95372 231 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 LDOC1O95751 146 aaPredicted RBP7.84□□□□□ -1.15
COL9A1-209ENST00000489861 CDK4P11802 303 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 CPA1P15085 419 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 TYMPP19971 482 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 ATP2C1P98194 919 aaPredicted RBP7.84□□□□□ -1.15
COL9A1-209ENST00000489861 TOB2Q14106 344 aaPredicted RBP7.84□□□□□ -1.15
COL9A1-209ENST00000489861 IGFBP7Q16270 282 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 INF2Q27J81 1249 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 KIAA1324Q6UXG2 1013 aaKnown RBP7.84□□□□□ -1.15
COL9A1-209ENST00000489861 KDM7AQ6ZMT4 941 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 SKAP1Q86WV1 359 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 CACTIN-AS1Q8N1I8 211 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 FAM26EQ8N5C1 309 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 CADM4Q8NFZ8 388 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 ERMNQ8TAM6 284 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 HSD17B14Q9BPX1 270 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 DPH1Q9BZG8 443 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 C2orf40Q9H1Z8 148 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 NCOA5Q9HCD5 579 aaKnown RBP7.84□□□□□ -1.15
COL9A1-209ENST00000489861 LRRC4CQ9HCJ2 640 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 PTPRHQ9HD43 1115 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 PLEKHB1Q9UF11 243 aaPredicted RBP7.84□□□□□ -1.15
COL9A1-209ENST00000489861 ARHGAP26Q9UNA1 814 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 CLCA2Q9UQC9 943 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 TNFSF13BQ9Y275 285 aa7.84□□□□□ -1.15
COL9A1-209ENST00000489861 HIVEP3Q5T1R4 2406 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 M0R2N6 131 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 LEFTY2O00292 366 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 ABLIM1O14639 778 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 DXOO77932 396 aaKnown RBP7.83□□□□□ -1.16
COL9A1-209ENST00000489861 XRCC6P12956 609 aaKnown RBP eCLIP7.83□□□□□ -1.16
COL9A1-209ENST00000489861 ATP2B1P20020 1258 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 AFF3P51826 1226 aaKnown RBP7.83□□□□□ -1.16
COL9A1-209ENST00000489861 GUCY2FP51841 1108 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 INSM1Q01101 510 aaPredicted RBP7.83□□□□□ -1.16
COL9A1-209ENST00000489861 SPAG1Q07617 926 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 STK3Q13188 491 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 PPP2R5AQ15172 486 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 CALCRLQ16602 461 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 SLC10A6Q3KNW5 377 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 SEZ6Q53EL9 994 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 PRAMEF14Q5SWL7 426 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 C10orf76Q5T2E6 689 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 HAUS3Q68CZ6 603 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 PADI6Q6TGC4 694 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 DSTYKQ6XUX3 929 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 TRMT11Q7Z4G4 463 aaKnown RBP7.83□□□□□ -1.16
COL9A1-209ENST00000489861 ETFBKMTQ8IXQ9 262 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 NAT16Q8N8M0 369 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 MCPH1Q8NEM0 835 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 KCNV2Q8TDN2 545 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 RFFLQ8WZ73 363 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 GABRG3Q99928 467 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 EIF2AK1Q9BQI3 630 aaKnown RBP7.83□□□□□ -1.16
COL9A1-209ENST00000489861 RAB34Q9BZG1 259 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 ZNF768Q9H5H4 540 aaKnown RBP7.83□□□□□ -1.16
COL9A1-209ENST00000489861 POLD4Q9HCU8 107 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 ASCL3Q9NQ33 180 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 TMLHEQ9NVH6 421 aa7.83□□□□□ -1.16
COL9A1-209ENST00000489861 ABI2Q9NYB9 513 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms