RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 SAMD15Q9P1V8 674 aa10.02□□□□□ -0.81
RAB3GAP1-205ENST00000489858 CITO14578 2027 aa10.02□□□□□ -0.81
RAB3GAP1-205ENST00000489858 A0A1B0GUA9 196 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 EXOC1LA0A1B0GW35 172 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 TMEM120BA0PK00 339 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 BTBD19C9JJ37 291 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 H0YHG0 523 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 CST8O60676 142 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 CSDE1O75534 798 aaKnown RBP10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 NPTXRO95502 500 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 TRUB2O95900 331 aaKnown RBP10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 IFNB1P01574 187 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 VIMP08670 466 aaKnown RBP10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 BRAFP15056 766 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 TIMP2P16035 220 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PECAM1P16284 738 aaPredicted RBP10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 YBX3P16989 372 aaKnown RBP eCLIP10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 MIPP30301 263 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 CTHP32929 405 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PHBP35232 272 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 IFNAR2P48551 515 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 VEGFBP49765 207 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ZNF143P52747 638 aaPredicted RBP10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 NDST1P52848 882 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 YARSP54577 528 aaKnown RBP10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 TFDP2Q14188 446 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 TMED2Q15363 201 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 DGKDQ16760 1214 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 SMTNL2Q2TAL5 461 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 DUSP28Q4G0W2 176 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 OR6B2Q6IFH4 312 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 CYP4F22Q6NT55 531 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 SLC27A1Q6PCB7 646 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PPP1R21Q6ZMI0 780 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PLEKHH3Q7Z736 793 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PNMA8AQ86V59 439 aaPredicted RBP10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 TDRPQ86YL5 185 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PPIL6Q8IXY8 311 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 LRRC34Q8IZ02 419 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 EMC1Q8N766 993 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ANKS4BQ8N8V4 417 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 KCTD6Q8NC69 237 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 BEST2Q8NFU1 509 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 HSPH1Q92598 858 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PRCCQ92733 491 aaPredicted RBP10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 MAML3Q96JK9 1138 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 SNX27Q96L92 541 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PWWP2AQ96N64 755 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 CDK15Q96Q40 435 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PRMT1Q99873 361 aaKnown RBP10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 KLF16Q9BXK1 252 aaPredicted RBP10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ABHD16BQ9H3Z7 469 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 RSAD1Q9HA92 442 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 KCNK9Q9NPC2 374 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 UBN1Q9NPG3 1134 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 SLC5A4Q9NY91 659 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 SENP1Q9P0U3 644 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 TJP2Q9UDY2 1190 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 TSPAN16Q9UKR8 245 aa10.01□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PDCD11Q14690 1871 aaKnown RBP10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 C11orf97A0A1B0GVM6 126 aaPredicted RBP10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 APOC4-APOC2K7ER74 178 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 SNAI1O95863 264 aaPredicted RBP10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 APOC2P02655 101 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ZSCAN5DPP0CG00 497 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 GHRP10912 638 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ETS1P14921 441 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 TSHRP16473 764 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 IL1R2P27930 398 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 GPD2P43304 727 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ARL4CP56559 192 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 WDR4P57081 412 aaKnown RBP10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 EIF3EP60228 445 aaKnown RBP10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 FKBP1BP68106 108 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ROR1Q01973 937 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ACTN3Q08043 901 aaPredicted RBP10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ACVR2BQ13705 512 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 KRT81Q14533 505 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PCBP1Q15365 356 aaKnown RBP eCLIP10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 HIF1AQ16665 826 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 FAM47CQ5HY64 1035 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 IQSEC1Q6DN90 963 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 NOTUMQ6P988 496 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 VSTM1Q6UX27 236 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ARHGEF18Q6ZSZ5 1173 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 FAM183BPQ6ZVS7 135 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 DPH6Q7L8W6 267 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 CATSPER4Q7RTX7 472 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 GPR142Q7Z601 462 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 PRUNE1Q86TP1 453 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 TAX1BP1Q86VP1 789 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 SESTD1Q86VW0 696 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 KIAA0319LQ8IZA0 1049 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ARFGAP1Q8N6T3 406 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 LRRC52Q8N7C0 313 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ANKRD42Q8N9B4 389 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 ATP11CQ8NB49 1132 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 GLIS1Q8NBF1 620 aa10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 CMASQ8NFW8 434 aaPredicted RBP10□□□□□ -0.81
RAB3GAP1-205ENST00000489858 MGARPQ8TDB4 240 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms