RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 EXOC3L4Q17RC7 722 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 SCARA3Q6AZY7 606 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 FAAH2Q6GMR7 532 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 GDF6Q6KF10 455 aaPredicted RBP10.26□□□□□ -0.77
NOD1-208ENST00000489614 RFWD3Q6PCD5 774 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 TRMT1LQ7Z2T5 733 aaKnown RBP10.26□□□□□ -0.77
NOD1-208ENST00000489614 PPFIBP2Q8ND30 876 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 TMEM40Q8WWA1 233 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 POMGNT1Q8WZA1 660 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 LUC7LQ9NQ29 371 aaKnown RBP10.26□□□□□ -0.77
NOD1-208ENST00000489614 PAK6Q9NQU5 681 aaPredicted RBP10.26□□□□□ -0.77
NOD1-208ENST00000489614 GCNT4Q9P109 453 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 ARL2BPQ9Y2Y0 163 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 RBMX2Q9Y388 322 aaKnown RBP10.26□□□□□ -0.77
NOD1-208ENST00000489614 DARSP14868 501 aaKnown RBP10.26□□□□□ -0.77
NOD1-208ENST00000489614 ARF4P18085 180 aaPredicted RBP10.26□□□□□ -0.77
NOD1-208ENST00000489614 ANXA13P27216 316 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 STIP1P31948 543 aaKnown RBP10.26□□□□□ -0.77
NOD1-208ENST00000489614 ZNF200P98182 395 aaPredicted RBP10.26□□□□□ -0.77
NOD1-208ENST00000489614 CMPK2Q5EBM0 449 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 UBXN11Q5T124 520 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 ATF7IP2Q5U623 682 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 TDRD10Q5VZ19 366 aaKnown RBP10.26□□□□□ -0.77
NOD1-208ENST00000489614 STKLD1Q8NE28 680 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 DHX38Q92620 1227 aaKnown RBP10.26□□□□□ -0.77
NOD1-208ENST00000489614 ERP27Q96DN0 273 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 DDX47Q9H0S4 455 aaKnown RBP10.26□□□□□ -0.77
NOD1-208ENST00000489614 DCLRE1BQ9H816 532 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 KLHL14Q9P2G3 628 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 APEX2Q9UBZ4 518 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 PRELID1Q9Y255 219 aa10.26□□□□□ -0.77
NOD1-208ENST00000489614 C17orf102A2RUQ5 167 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 GOLGA8IPA6NC78 632 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 GOLGA8JA6NMD2 632 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 OXSR1O95747 527 aaPredicted RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 PDGFRBP09619 1106 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 MAGEA1P43355 309 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 ARPC4P59998 168 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 MGAT5Q09328 741 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 ARHGEF19Q8IW93 802 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 KBTBD2Q8IY47 623 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 PPP2R3CQ969Q6 453 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 TLCD1Q96CP7 247 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 STK33Q9BYT3 514 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 SENP6Q9GZR1 1112 aaPredicted RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 WBP1LQ9NX94 342 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 PJA2O43164 708 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 CBX6O95503 412 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 MYL3P08590 195 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 SRGAP2CP0DJJ0 459 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 RARBP10826 455 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 PORP16435 677 aaPredicted RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 TMED10P49755 219 aaKnown RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 TNNC1P63316 161 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 NSUN2Q08J23 767 aaKnown RBP eCLIP10.25□□□□□ -0.77
NOD1-208ENST00000489614 KPNB1Q14974 876 aaKnown RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 SEPT7Q16181 437 aaKnown RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 CLPPQ16740 277 aaPredicted RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 DCAF17Q5H9S7 520 aaPredicted RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 KLHL35Q6PF15 583 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 LRRC74BQ6ZQY2 392 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 MARK2Q7KZI7 788 aaKnown RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 WDR49Q8IV35 697 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 RAVER1Q8IY67 606 aaKnown RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 ENDOVQ8N8Q3 282 aaKnown RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 DQX1Q8TE96 717 aaKnown RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 SREK1Q8WXA9 508 aaKnown RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 CCDC127Q96BQ5 260 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 KREMEN1Q96MU8 473 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 FAM213AQ9BRX8 229 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 XPNPEP3Q9NQH7 507 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 TOPORSQ9NS56 1045 aaPredicted RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 FAM207AQ9NSI2 230 aaPredicted RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 MRGBPQ9NV56 204 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 FOXO6A8MYZ6 492 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 MAP3K7O43318 606 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 MMP13P45452 471 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 MNX1P50219 401 aaPredicted RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 NEK2P51955 445 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 CRYBB1P53674 252 aaPredicted RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 PMS2P54278 862 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 CYLC2Q14093 348 aaPredicted RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 ZBTB6Q15916 424 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 KCNA10Q16322 511 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 WDR72Q3MJ13 1102 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 ZNF394Q53GI3 561 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 KRT39Q6A163 491 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 SV2AQ7L0J3 742 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 TMC3Q7Z5M5 1100 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 POP1Q99575 1024 aaKnown RBP10.25□□□□□ -0.77
NOD1-208ENST00000489614 MSTO1Q9BUK6 570 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 MYLK2Q9H1R3 596 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 NLRC4Q9NPP4 1024 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 ATAD3AQ9NVI7 634 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 AMACRQ9UHK6 382 aa10.25□□□□□ -0.77
NOD1-208ENST00000489614 FAM170AA1A519 330 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 TBX10O75333 385 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 PALMO75781 387 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 PGM3O95394 542 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms