RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 CEP295NLQ96MC4 621 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 CORO1BQ9BR76 489 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 MIS12Q9H081 205 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 CLEC1BQ9P126 229 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 NENFQ9UMX5 172 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 PPP2R2CQ9Y2T4 447 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 ASB3Q9Y575 518 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 SPTBN5Q9NRC6 3674 aaKnown RBP14.99□□□□□ -0.01
CLDN11-209ENST00000489485 MYO16Q9Y6X6 1858 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 A0A0U1RQJ8 604 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 RTN3O95197 1032 aaPredicted RBP14.99□□□□□ -0.01
CLDN11-209ENST00000489485 ABCB4P21439 1286 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 YWHAQP27348 245 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 ACADSBP45954 432 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 SNX16P57768 344 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 PTPN20Q4JDL3 420 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 RAB41Q5JT25 222 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 MSANTD4Q8NCY6 345 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 FEZF2Q8TBJ5 459 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 ATRIPQ8WXE1 791 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 SMG7Q92540 1137 aaKnown RBP14.99□□□□□ -0.01
CLDN11-209ENST00000489485 SLC4A5Q9BY07 1137 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 ISCUQ9H1K1 167 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 FBXO44Q9H4M3 255 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 HCFC1R1Q9NWW0 138 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 TRMT1Q9NXH9 659 aaKnown RBP14.99□□□□□ -0.01
CLDN11-209ENST00000489485 EHD2Q9NZN4 543 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 TJP2Q9UDY2 1190 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 C5orf42Q9H799 3197 aa14.99□□□□□ -0.01
CLDN11-209ENST00000489485 C2orf16Q68DN1 1984 aa14.98□□□□□ -0.01
CLDN11-209ENST00000489485 USP17L7P0C7H9 530 aa14.98□□□□□ -0.01
CLDN11-209ENST00000489485 HOXB8P17481 243 aaPredicted RBP14.98□□□□□ -0.01
CLDN11-209ENST00000489485 PTPN2P17706 415 aa14.98□□□□□ -0.01
CLDN11-209ENST00000489485 LTBRP36941 435 aa14.98□□□□□ -0.01
CLDN11-209ENST00000489485 GALCP54803 685 aa14.98□□□□□ -0.01
CLDN11-209ENST00000489485 CYP4A22Q5TCH4 519 aa14.98□□□□□ -0.01
CLDN11-209ENST00000489485 SYCE2Q6PIF2 218 aa14.98□□□□□ -0.01
CLDN11-209ENST00000489485 MMS22LQ6ZRQ5 1243 aa14.98□□□□□ -0.01
CLDN11-209ENST00000489485 KIAA1328Q86T90 577 aa14.98□□□□□ -0.01
CLDN11-209ENST00000489485 TMEM110Q86TL2 294 aa14.98□□□□□ -0.01
CLDN11-209ENST00000489485 C17orf53Q8N3J3 647 aaPredicted RBP14.98□□□□□ -0.01
CLDN11-209ENST00000489485 KIAA1524Q8TCG1 905 aa14.98□□□□□ -0.01
CLDN11-209ENST00000489485 ZNF707Q96C28 371 aaPredicted RBP14.98□□□□□ -0.01
CLDN11-209ENST00000489485 C18orf8Q96DM3 657 aa14.98□□□□□ -0.01
CLDN11-209ENST00000489485 C11orf70Q9BRQ4 267 aa14.98□□□□□ -0.01
CLDN11-209ENST00000489485 ASAH2Q9NR71 780 aa14.98□□□□□ -0.01
CLDN11-209ENST00000489485 ADAM22Q9P0K1 906 aa14.98□□□□□ -0.01
CLDN11-209ENST00000489485 RCCD1A6NED2 376 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 GABBR2O75899 941 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 ZBED1O96006 694 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 HMGA1P17096 107 aaKnown RBP14.97□□□□□ -0.01
CLDN11-209ENST00000489485 MMP8P22894 467 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 CLUL1Q15846 466 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 C10orf76Q5T2E6 689 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 GRASPQ7Z6J2 395 aaPredicted RBP14.97□□□□□ -0.01
CLDN11-209ENST00000489485 FBXO32Q969P5 355 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 SLITRK1Q96PX8 696 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 ULBP1Q9BZM6 244 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 LUC7LQ9NQ29 371 aaKnown RBP14.97□□□□□ -0.01
CLDN11-209ENST00000489485 CYLDQ9NQC7 956 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 CHORDC1Q9UHD1 332 aaPredicted RBP14.97□□□□□ -0.01
CLDN11-209ENST00000489485 USP27XA6NNY8 438 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 ABL1P00519 1130 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 ERBB2P04626 1255 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 H2AFZP0C0S5 128 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 RPL34P49207 117 aaKnown RBP14.97□□□□□ -0.01
CLDN11-209ENST00000489485 VAV2P52735 878 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 TAF10Q12962 218 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 COL19A1Q14993 1142 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 OR6B2Q6IFH4 312 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 CES5AQ6NT32 575 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 PPP1R2P3Q6NXS1 205 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 H2AFVQ71UI9 128 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 PHLDB2Q86SQ0 1253 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 PHF13Q86YI8 300 aaPredicted RBP14.97□□□□□ -0.01
CLDN11-209ENST00000489485 MCOLN2Q8IZK6 566 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 HS6ST3Q8IZP7 471 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 CMASQ8NFW8 434 aaPredicted RBP14.97□□□□□ -0.01
CLDN11-209ENST00000489485 CLEC4CQ8WTT0 213 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 NDRG1Q92597 394 aaKnown RBP14.97□□□□□ -0.01
CLDN11-209ENST00000489485 TRMT2BQ96GJ1 504 aaKnown RBP14.97□□□□□ -0.01
CLDN11-209ENST00000489485 MYRFLQ96LU7 910 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 LACRTQ9GZZ8 138 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 THAP2Q9H0W7 228 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 CNGB3Q9NQW8 809 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 DNMT3BQ9UBC3 853 aaKnown RBP14.97□□□□□ -0.01
CLDN11-209ENST00000489485 UXTQ9UBK9 157 aaPredicted RBP14.97□□□□□ -0.01
CLDN11-209ENST00000489485 CDH22Q9UJ99 828 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 USP3Q9Y6I4 520 aa14.97□□□□□ -0.01
CLDN11-209ENST00000489485 ANKRD62A6NC57 917 aa14.96□□□□□ -0.01
CLDN11-209ENST00000489485 H3BQ06 376 aaPredicted RBP14.96□□□□□ -0.01
CLDN11-209ENST00000489485 PAPSS1O43252 624 aaPredicted RBP14.96□□□□□ -0.01
CLDN11-209ENST00000489485 ATMINO43313 823 aaPredicted RBP14.96□□□□□ -0.01
CLDN11-209ENST00000489485 CALB1P05937 261 aa14.96□□□□□ -0.01
CLDN11-209ENST00000489485 MYL4P12829 197 aa14.96□□□□□ -0.01
CLDN11-209ENST00000489485 KCNA5P22460 613 aa14.96□□□□□ -0.01
CLDN11-209ENST00000489485 PABPC1LQ4VXU2 614 aaKnown RBP14.96□□□□□ -0.01
CLDN11-209ENST00000489485 MON1BQ7L1V2 547 aa14.96□□□□□ -0.01
CLDN11-209ENST00000489485 GPR149Q86SP6 731 aa14.96□□□□□ -0.01
CLDN11-209ENST00000489485 TTLL2Q9BWV7 592 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms