RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 RIOK3O14730 519 aaKnown RBP21.89■■□□□ 1.1
SND1-214ENST00000489417 TNFRSF10BO14763 440 aa21.89■■□□□ 1.1
SND1-214ENST00000489417 ZBED1O96006 694 aa21.89■■□□□ 1.1
SND1-214ENST00000489417 GLI1P08151 1106 aa21.89■■□□□ 1.1
SND1-214ENST00000489417 HAPLN1P10915 354 aaPredicted RBP21.89■■□□□ 1.1
SND1-214ENST00000489417 DNAJB2P25686 324 aa21.89■■□□□ 1.1
SND1-214ENST00000489417 SLC5A3P53794 718 aa21.89■■□□□ 1.1
SND1-214ENST00000489417 CREMQ03060 361 aa21.89■■□□□ 1.1
SND1-214ENST00000489417 ACAP1Q15027 740 aa21.89■■□□□ 1.1
SND1-214ENST00000489417 TTC9BQ8N6N2 239 aa21.89■■□□□ 1.1
SND1-214ENST00000489417 AUTS2Q8WXX7 1259 aa21.89■■□□□ 1.1
SND1-214ENST00000489417 IRGQQ8WZA9 623 aa21.89■■□□□ 1.1
SND1-214ENST00000489417 FAM149B1Q96BN6 582 aa21.89■■□□□ 1.1
SND1-214ENST00000489417 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.89■■□□□ 1.1
SND1-214ENST00000489417 SSX2IPQ9Y2D8 614 aa21.89■■□□□ 1.1
SND1-214ENST00000489417 PCDHA3Q9Y5H8 950 aa21.89■■□□□ 1.1
SND1-214ENST00000489417 USP3Q9Y6I4 520 aa21.89■■□□□ 1.1
SND1-214ENST00000489417 CES2O00748 559 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 ZNF185O15231 689 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 DAB1O75553 588 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 USP17L7P0C7H9 530 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 CTSAP10619 480 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 SDC4P31431 198 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 SSR1P43307 286 aaKnown RBP21.89■■□□□ 1.09
SND1-214ENST00000489417 MARCKSL1P49006 195 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 GPR15P49685 360 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 TAS2R40P59535 323 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 DDR2Q16832 855 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 MGAT5BQ3V5L5 792 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 DAB2IPQ5VWQ8 1189 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 TPGS2Q68CL5 300 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 RHOT1Q8IXI2 618 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 CAPZA3Q96KX2 299 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 SEPT5Q99719 369 aaPredicted RBP21.89■■□□□ 1.09
SND1-214ENST00000489417 PLVAPQ9BX97 442 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 CRISPLD1Q9H336 500 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.89■■□□□ 1.09
SND1-214ENST00000489417 FNIP2Q9P278 1114 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 AFF4Q9UHB7 1163 aaKnown RBP21.89■■□□□ 1.09
SND1-214ENST00000489417 SLC27A5Q9Y2P5 690 aa21.89■■□□□ 1.09
SND1-214ENST00000489417 GRXCR1A8MXD5 290 aa21.88■■□□□ 1.09
SND1-214ENST00000489417 PSTPIP1O43586 416 aa21.88■■□□□ 1.09
SND1-214ENST00000489417 DESP17661 470 aa21.88■■□□□ 1.09
SND1-214ENST00000489417 PEX5P50542 639 aa21.88■■□□□ 1.09
SND1-214ENST00000489417 YWHAZP63104 245 aaKnown RBP21.88■■□□□ 1.09
SND1-214ENST00000489417 DUSP4Q13115 394 aa21.88■■□□□ 1.09
SND1-214ENST00000489417 RAB33AQ14088 237 aa21.88■■□□□ 1.09
SND1-214ENST00000489417 CCDC14Q49A88 953 aa21.88■■□□□ 1.09
SND1-214ENST00000489417 PM20D1Q6GTS8 502 aa21.88■■□□□ 1.09
SND1-214ENST00000489417 FAM109BQ6ICB4 259 aaPredicted RBP21.88■■□□□ 1.09
SND1-214ENST00000489417 BHLHA9Q7RTU4 235 aa21.88■■□□□ 1.09
SND1-214ENST00000489417 ALG3Q92685 438 aa21.88■■□□□ 1.09
SND1-214ENST00000489417 DDX23Q9BUQ8 820 aaKnown RBP21.88■■□□□ 1.09
SND1-214ENST00000489417 RXFP1Q9HBX9 757 aa21.88■■□□□ 1.09
SND1-214ENST00000489417 LZTS1Q9Y250 596 aa21.88■■□□□ 1.09
SND1-214ENST00000489417 YJEFN3A6XGL0 299 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 E7ENQ6 273 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 LILRB3O75022 631 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 RNF8O76064 485 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 ABLIM3O94929 683 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 MYOGP15173 224 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 PTPN9P43378 593 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 RPL10AP62906 217 aaKnown RBP21.87■■□□□ 1.09
SND1-214ENST00000489417 SDHAF4Q5VUM1 108 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 HFE2Q6ZVN8 426 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 CREG2Q8IUH2 290 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 DEFB106AQ8N104 65 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 NUP93Q8N1F7 819 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 SCAMP5Q8TAC9 235 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 ZNF461Q8TAF7 563 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 CFAP57Q96MR6 1250 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 SLC2A13Q96QE2 648 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 C17orf80Q9BSJ5 609 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 CARD6Q9BX69 1037 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 UBE2OQ9C0C9 1292 aaKnown RBP21.87■■□□□ 1.09
SND1-214ENST00000489417 CARD9Q9H257 536 aa21.87■■□□□ 1.09
SND1-214ENST00000489417 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.87■■□□□ 1.09
SND1-214ENST00000489417 LRCH4O75427 683 aa21.86■■□□□ 1.09
SND1-214ENST00000489417 SOAT2O75908 522 aa21.86■■□□□ 1.09
SND1-214ENST00000489417 ARHGEF15O94989 841 aa21.86■■□□□ 1.09
SND1-214ENST00000489417 LTFP02788 710 aa21.86■■□□□ 1.09
SND1-214ENST00000489417 MATKP42679 507 aa21.86■■□□□ 1.09
SND1-214ENST00000489417 RWDD2BP57060 319 aa21.86■■□□□ 1.09
SND1-214ENST00000489417 CKAP4Q07065 602 aaKnown RBP21.86■■□□□ 1.09
SND1-214ENST00000489417 IFRD2Q12894 506 aaPredicted RBP21.86■■□□□ 1.09
SND1-214ENST00000489417 C15orf59Q2T9L4 293 aaPredicted RBP21.86■■□□□ 1.09
SND1-214ENST00000489417 LRRC38Q5VT99 294 aa21.86■■□□□ 1.09
SND1-214ENST00000489417 DCAF12L1Q5VU92 463 aa21.86■■□□□ 1.09
SND1-214ENST00000489417 ARFGAP1Q8N6T3 406 aa21.86■■□□□ 1.09
SND1-214ENST00000489417 GOLGA1Q92805 767 aa21.86■■□□□ 1.09
SND1-214ENST00000489417 SPATA17Q96L03 361 aa21.86■■□□□ 1.09
SND1-214ENST00000489417 POPDC2Q9HBU9 364 aa21.86■■□□□ 1.09
SND1-214ENST00000489417 HSFX1Q9UBD0 423 aa21.86■■□□□ 1.09
SND1-214ENST00000489417 RNF14Q9UBS8 474 aa21.86■■□□□ 1.09
SND1-214ENST00000489417 PCDHA11Q9Y5I1 949 aa21.86■■□□□ 1.09
SND1-214ENST00000489417 C5orf67F2Z3F1 127 aa21.85■■□□□ 1.09
SND1-214ENST00000489417 CEP104O60308 925 aa21.85■■□□□ 1.09
SND1-214ENST00000489417 SLU7O95391 586 aaKnown RBP21.85■■□□□ 1.09
SND1-214ENST00000489417 TCF4P15884 667 aa21.85■■□□□ 1.09
SND1-214ENST00000489417 CA8P35219 290 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms