RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 MTAPQ13126 283 aa22.38■■□□□ 1.17
LIME1-207ENST00000489212 PON2Q15165 354 aa22.38■■□□□ 1.17
LIME1-207ENST00000489212 PDGFRLQ15198 375 aa22.38■■□□□ 1.17
LIME1-207ENST00000489212 SNX30Q5VWJ9 437 aa22.38■■□□□ 1.17
LIME1-207ENST00000489212 UBR7Q8N806 425 aa22.38■■□□□ 1.17
LIME1-207ENST00000489212 LMO3Q8TAP4 145 aa22.38■■□□□ 1.17
LIME1-207ENST00000489212 LINC00597Q9H2U6 94 aa22.38■■□□□ 1.17
LIME1-207ENST00000489212 CHRDQ9H2X0 955 aa22.38■■□□□ 1.17
LIME1-207ENST00000489212 RBM12Q9NTZ6 932 aaKnown RBP22.38■■□□□ 1.17
LIME1-207ENST00000489212 DUS2Q9NX74 493 aaKnown RBP22.38■■□□□ 1.17
LIME1-207ENST00000489212 SMPD4Q9NXE4 827 aa22.38■■□□□ 1.17
LIME1-207ENST00000489212 RWDD2AQ9UIY3 292 aa22.38■■□□□ 1.17
LIME1-207ENST00000489212 CPQQ9Y646 472 aa22.38■■□□□ 1.17
LIME1-207ENST00000489212 MYO16Q9Y6X6 1858 aa22.37■■□□□ 1.17
LIME1-207ENST00000489212 COCHO43405 550 aa22.37■■□□□ 1.17
LIME1-207ENST00000489212 GNA14O95837 355 aa22.37■■□□□ 1.17
LIME1-207ENST00000489212 SP9P0CG40 484 aa22.37■■□□□ 1.17
LIME1-207ENST00000489212 EML3Q32P44 896 aa22.37■■□□□ 1.17
LIME1-207ENST00000489212 C1orf228Q6PIY5 440 aa22.37■■□□□ 1.17
LIME1-207ENST00000489212 DUSP16Q9BY84 665 aa22.37■■□□□ 1.17
LIME1-207ENST00000489212 FAM124BQ9H5Z6 455 aaPredicted RBP22.37■■□□□ 1.17
LIME1-207ENST00000489212 CCSER2Q9H7U1 834 aa22.37■■□□□ 1.17
LIME1-207ENST00000489212 RIF1Q5UIP0 2472 aaKnown RBP22.37■■□□□ 1.17
LIME1-207ENST00000489212 WDR87Q6ZQQ6 2873 aa22.36■■□□□ 1.17
LIME1-207ENST00000489212 PROB1E7EW31 1015 aa22.36■■□□□ 1.17
LIME1-207ENST00000489212 IFNAR2P48551 515 aa22.36■■□□□ 1.17
LIME1-207ENST00000489212 KCNH2Q12809 1159 aa22.36■■□□□ 1.17
LIME1-207ENST00000489212 GAS6Q14393 721 aa22.36■■□□□ 1.17
LIME1-207ENST00000489212 HECTD3Q5T447 861 aa22.36■■□□□ 1.17
LIME1-207ENST00000489212 ARHGAP17Q68EM7 881 aa22.36■■□□□ 1.17
LIME1-207ENST00000489212 KAT5Q92993 513 aa22.36■■□□□ 1.17
LIME1-207ENST00000489212 ZFRQ96KR1 1074 aaKnown RBP22.36■■□□□ 1.17
LIME1-207ENST00000489212 FBXO44Q9H4M3 255 aa22.36■■□□□ 1.17
LIME1-207ENST00000489212 ECT2Q9H8V3 914 aa22.36■■□□□ 1.17
LIME1-207ENST00000489212 PNPLA8Q9NP80 782 aa22.36■■□□□ 1.17
LIME1-207ENST00000489212 P4HA2O15460 535 aa22.35■■□□□ 1.17
LIME1-207ENST00000489212 CYP26A1O43174 497 aa22.35■■□□□ 1.17
LIME1-207ENST00000489212 LAMTOR5O43504 91 aa22.35■■□□□ 1.17
LIME1-207ENST00000489212 MBL2P11226 248 aaPredicted RBP22.35■■□□□ 1.17
LIME1-207ENST00000489212 ACO1P21399 889 aaKnown RBP22.35■■□□□ 1.17
LIME1-207ENST00000489212 NAIF1Q69YI7 327 aaPredicted RBP22.35■■□□□ 1.17
LIME1-207ENST00000489212 NT5C1BQ96P26 610 aa22.35■■□□□ 1.17
LIME1-207ENST00000489212 DNAI2Q9GZS0 605 aa22.35■■□□□ 1.17
LIME1-207ENST00000489212 SCML2Q9UQR0 700 aa22.35■■□□□ 1.17
LIME1-207ENST00000489212 FANCMQ8IYD8 2048 aa22.35■■□□□ 1.17
LIME1-207ENST00000489212 SCAMP3O14828 347 aaKnown RBP22.34■■□□□ 1.17
LIME1-207ENST00000489212 TBXAS1P24557 533 aaPredicted RBP22.34■■□□□ 1.17
LIME1-207ENST00000489212 GJA4P35212 333 aa22.34■■□□□ 1.17
LIME1-207ENST00000489212 TUBP50607 506 aa22.34■■□□□ 1.17
LIME1-207ENST00000489212 KIF11P52732 1056 aa22.34■■□□□ 1.17
LIME1-207ENST00000489212 CCINQ13939 588 aa22.34■■□□□ 1.17
LIME1-207ENST00000489212 Q6ZS52 159 aa22.34■■□□□ 1.17
LIME1-207ENST00000489212 MLKLQ8NB16 471 aa22.34■■□□□ 1.17
LIME1-207ENST00000489212 ATP2A3Q93084 1043 aa22.34■■□□□ 1.17
LIME1-207ENST00000489212 NUP62CLQ9H1M0 184 aa22.34■■□□□ 1.17
LIME1-207ENST00000489212 PRMT8Q9NR22 394 aaPredicted RBP22.34■■□□□ 1.17
LIME1-207ENST00000489212 OSER1Q9NX31 292 aa22.34■■□□□ 1.17
LIME1-207ENST00000489212 CFAP97Q9P2B7 532 aa22.34■■□□□ 1.17
LIME1-207ENST00000489212 FBXO4Q9UKT5 387 aa22.34■■□□□ 1.17
LIME1-207ENST00000489212 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.34■■□□□ 1.17
LIME1-207ENST00000489212 R4GN57 208 aa22.34■■□□□ 1.17
LIME1-207ENST00000489212 FGFR1OPO95684 399 aaKnown RBP22.33■■□□□ 1.17
LIME1-207ENST00000489212 AFPP02771 609 aaKnown RBP22.33■■□□□ 1.17
LIME1-207ENST00000489212 CCDC192P0DO97 292 aa22.33■■□□□ 1.17
LIME1-207ENST00000489212 YWHAEP62258 255 aaKnown RBP22.33■■□□□ 1.17
LIME1-207ENST00000489212 CSTF1Q05048 431 aaKnown RBP22.33■■□□□ 1.17
LIME1-207ENST00000489212 LRRC32Q14392 662 aa22.33■■□□□ 1.17
LIME1-207ENST00000489212 FSTL4Q6MZW2 842 aa22.33■■□□□ 1.17
LIME1-207ENST00000489212 TSSK4Q6SA08 328 aa22.33■■□□□ 1.17
LIME1-207ENST00000489212 TTC30AQ86WT1 665 aa22.33■■□□□ 1.17
LIME1-207ENST00000489212 IRF2BP1Q8IU81 584 aa22.33■■□□□ 1.17
LIME1-207ENST00000489212 ARHGEF19Q8IW93 802 aa22.33■■□□□ 1.17
LIME1-207ENST00000489212 CPA6Q8N4T0 437 aa22.33■■□□□ 1.17
LIME1-207ENST00000489212 EHBP1Q8NDI1 1231 aa22.33■■□□□ 1.17
LIME1-207ENST00000489212 NMUR1Q9HB89 426 aa22.33■■□□□ 1.17
LIME1-207ENST00000489212 FBRSL1Q9HCM7 1045 aaKnown RBP22.33■■□□□ 1.17
LIME1-207ENST00000489212 TLR8Q9NR97 1041 aaKnown RBP22.33■■□□□ 1.17
LIME1-207ENST00000489212 ATG2BQ96BY7 2078 aa22.32■■□□□ 1.16
LIME1-207ENST00000489212 TRDMT1O14717 391 aaKnown RBP22.32■■□□□ 1.16
LIME1-207ENST00000489212 TBX18O95935 607 aa22.32■■□□□ 1.16
LIME1-207ENST00000489212 CETN1Q12798 172 aa22.32■■□□□ 1.16
LIME1-207ENST00000489212 DPCR1Q3MIW9 517 aa22.32■■□□□ 1.16
LIME1-207ENST00000489212 TMEM196Q5HYL7 178 aa22.32■■□□□ 1.16
LIME1-207ENST00000489212 DGKKQ5KSL6 1271 aa22.32■■□□□ 1.16
LIME1-207ENST00000489212 MAMSTRQ6ZN01 415 aa22.32■■□□□ 1.16
LIME1-207ENST00000489212 RRAGAQ7L523 313 aa22.32■■□□□ 1.16
LIME1-207ENST00000489212 PPM1KQ8N3J5 372 aa22.32■■□□□ 1.16
LIME1-207ENST00000489212 ANKRD52Q8NB46 1076 aa22.32■■□□□ 1.16
LIME1-207ENST00000489212 WBP2Q969T9 261 aa22.32■■□□□ 1.16
LIME1-207ENST00000489212 CNOT6LQ96LI5 555 aaKnown RBP22.32■■□□□ 1.16
LIME1-207ENST00000489212 USP3Q9Y6I4 520 aa22.32■■□□□ 1.16
LIME1-207ENST00000489212 MYOFQ9NZM1 2061 aa22.32■■□□□ 1.16
LIME1-207ENST00000489212 FAM186AA6NE01 2351 aa22.31■■□□□ 1.16
LIME1-207ENST00000489212 A0A1W2PQH9 124 aa22.31■■□□□ 1.16
LIME1-207ENST00000489212 RNF225M0QZC1 329 aaPredicted RBP22.31■■□□□ 1.16
LIME1-207ENST00000489212 TULP2O00295 520 aa22.31■■□□□ 1.16
LIME1-207ENST00000489212 TLR5O60602 858 aa22.31■■□□□ 1.16
LIME1-207ENST00000489212 TDGF1P13385 188 aa22.31■■□□□ 1.16
LIME1-207ENST00000489212 GALK1P51570 392 aa22.31■■□□□ 1.16
LIME1-207ENST00000489212 GOLGA7BQ2TAP0 167 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms