RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 IL1R2P27930 398 aa20.33■□□□□ 0.84
HMG20B-213ENST00000488973 RFC1P35251 1148 aaPredicted RBP20.33■□□□□ 0.84
HMG20B-213ENST00000488973 NAMPTP43490 491 aa20.33■□□□□ 0.84
HMG20B-213ENST00000488973 MTERF2Q49AM1 385 aa20.33■□□□□ 0.84
HMG20B-213ENST00000488973 XKR3Q5GH77 459 aa20.33■□□□□ 0.84
HMG20B-213ENST00000488973 ARFGAP1Q8N6T3 406 aa20.33■□□□□ 0.84
HMG20B-213ENST00000488973 PNPLA8Q9NP80 782 aa20.33■□□□□ 0.84
HMG20B-213ENST00000488973 PDP2Q9P2J9 529 aa20.33■□□□□ 0.84
HMG20B-213ENST00000488973 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.32■□□□□ 0.84
HMG20B-213ENST00000488973 RBM47A0AV96 593 aaKnown RBP20.32■□□□□ 0.84
HMG20B-213ENST00000488973 KBTBD13C9JR72 458 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 I3L4J1 428 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 COPEO14579 308 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 NR3C2P08235 984 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 EIF3EP60228 445 aaKnown RBP20.32■□□□□ 0.84
HMG20B-213ENST00000488973 MAP3K10Q02779 954 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 CDK18Q07002 472 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 MTM1Q13496 603 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 WDR78Q5VTH9 848 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 TTC39BQ5VTQ0 682 aaPredicted RBP20.32■□□□□ 0.84
HMG20B-213ENST00000488973 DPY19L2Q6NUT2 758 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 TAB3Q8N5C8 712 aaPredicted RBP20.32■□□□□ 0.84
HMG20B-213ENST00000488973 FAM71DQ8N9W8 422 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 DEPTORQ8TB45 409 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 FAM161BQ96MY7 647 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 TARS2Q9BW92 718 aaKnown RBP20.32■□□□□ 0.84
HMG20B-213ENST00000488973 JPH1Q9HDC5 661 aaPredicted RBP20.32■□□□□ 0.84
HMG20B-213ENST00000488973 CISHQ9NSE2 258 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 ARMCX1Q9P291 453 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 PPME1Q9Y570 386 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 KAT6AQ92794 2004 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 CST3P01034 146 aaPredicted RBP20.32■□□□□ 0.84
HMG20B-213ENST00000488973 KRT3P12035 628 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 AMPD1P23109 780 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 POLR2BP30876 1174 aaKnown RBP20.32■□□□□ 0.84
HMG20B-213ENST00000488973 KCNT1Q5JUK3 1230 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 FAM83AQ86UY5 434 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 ALYREFQ86V81 257 aaKnown RBP20.32■□□□□ 0.84
HMG20B-213ENST00000488973 SLC26A11Q86WA9 606 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 SMC1BQ8NDV3 1235 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 SRPK1Q96SB4 655 aaKnown RBP20.32■□□□□ 0.84
HMG20B-213ENST00000488973 GMLQ99445 158 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 FAM192AQ9GZU8 254 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 PORCNQ9H237 461 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 DNAJB4Q9UDY4 337 aa20.32■□□□□ 0.84
HMG20B-213ENST00000488973 PARP14Q460N5 1801 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 E5RJQ4 531 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 MCF2LO15068 1137 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 TGFB2P61812 414 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 TRMT5Q32P41 509 aaKnown RBP20.31■□□□□ 0.84
HMG20B-213ENST00000488973 ABHD15Q6UXT9 468 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 KBTBD2Q8IY47 623 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 PHC3Q8NDX5 983 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 FBXO40Q9UH90 709 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 CTDP1Q9Y5B0 961 aaPredicted RBP20.31■□□□□ 0.84
HMG20B-213ENST00000488973 WASF2Q9Y6W5 498 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 RBP3P10745 1247 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 YWHAGP61981 247 aaKnown RBP eCLIP20.31■□□□□ 0.84
HMG20B-213ENST00000488973 DEUP1Q05D60 604 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 C6orf163Q5TEZ5 329 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 ATG16L1Q676U5 607 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 SCARA3Q6AZY7 606 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 SMYD5Q6GMV2 418 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 RFX6Q8HWS3 928 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 SCUBE1Q8IWY4 988 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 TMEM143Q96AN5 459 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 LBHD1Q9BQE6 289 aaPredicted RBP20.31■□□□□ 0.84
HMG20B-213ENST00000488973 PPP1R12CQ9BZL4 782 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 NIF3L1Q9GZT8 377 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 PHF24Q9UPV7 400 aa20.31■□□□□ 0.84
HMG20B-213ENST00000488973 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.31■□□□□ 0.84
HMG20B-213ENST00000488973 FER1L6Q2WGJ9 1857 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 LRRIQ4A6NIV6 560 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 H3BRJ5 948 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 TM7SF2O76062 418 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 ATP5BP06576 529 aaKnown RBP20.3■□□□□ 0.84
HMG20B-213ENST00000488973 STIP1P31948 543 aaKnown RBP20.3■□□□□ 0.84
HMG20B-213ENST00000488973 ACTR2P61160 394 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 GRM1Q13255 1194 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 BAATQ14032 418 aaPredicted RBP20.3■□□□□ 0.84
HMG20B-213ENST00000488973 MYBPC3Q14896 1274 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 ZNF394Q53GI3 561 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 FOXB2Q5VYV0 432 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 TREML1Q86YW5 311 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 WDR49Q8IV35 697 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 TFAP2BQ92481 460 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 WWP1Q9H0M0 922 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 ZNF180Q9UJW8 692 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 PLA2G4CQ9UP65 541 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 PLLPQ9Y342 182 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 TELO2Q9Y4R8 837 aa20.3■□□□□ 0.84
HMG20B-213ENST00000488973 CIB2O75838 187 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 CD48P09326 243 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 ANPEPP15144 967 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 CPA2P48052 419 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 KCNJ11Q14654 390 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 TBCCQ15814 346 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 DNAL1Q4LDG9 190 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 BRSK2Q8IWQ3 736 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 KIAA0319LQ8IZA0 1049 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms