RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 ZC3H3Q8IXZ2 948 aaKnown RBP14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 SUMF1Q8NBK3 374 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 CD101Q93033 1021 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 EEF2KMTQ96G04 330 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 HNRNPABQ99729 332 aaKnown RBP14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 P2RY13Q9BPV8 354 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 EPC1Q9H2F5 836 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 PNPLA8Q9NP80 782 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 RAB20Q9NX57 234 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 IL37Q9NZH6 218 aa14.62□□□□□ -0.07
SPTLC1-207ENST00000488921 CD58P19256 250 aa14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 ADORA2BP29275 332 aa14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 MAP3K7CLP57077 242 aa14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 FSTL4Q6MZW2 842 aa14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 C12orf29Q8N999 325 aa14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 CCDC26Q8TAB7 109 aa14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 SCAMP5Q8TAC9 235 aa14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 CHFRQ96EP1 664 aa14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 CYFIP2Q96F07 1278 aa14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 DHTKD1Q96HY7 919 aaPredicted RBP14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 TWNKQ96RR1 684 aa14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 SMOQ99835 787 aa14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 RNF38Q9H0F5 515 aa14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 METTL14Q9HCE5 456 aaKnown RBP14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 TLR8Q9NR97 1041 aaKnown RBP14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 NCDNQ9UBB6 729 aa14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 ARMCX3Q9UH62 379 aaPredicted RBP14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 RAB23Q9ULC3 237 aa14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 SMG5Q9UPR3 1016 aaKnown RBP14.61□□□□□ -0.07
SPTLC1-207ENST00000488921 CNR2P34972 360 aa14.6□□□□□ -0.07
SPTLC1-207ENST00000488921 ANKRD40Q6AI12 368 aa14.6□□□□□ -0.07
SPTLC1-207ENST00000488921 CLEC20AQ6ZU45 233 aa14.6□□□□□ -0.07
SPTLC1-207ENST00000488921 LONP2Q86WA8 852 aa14.6□□□□□ -0.07
SPTLC1-207ENST00000488921 ZMIZ2Q8NF64 920 aa14.6□□□□□ -0.07
SPTLC1-207ENST00000488921 ERCC4Q92889 916 aaPredicted RBP14.6□□□□□ -0.07
SPTLC1-207ENST00000488921 OTUB2Q96DC9 234 aa14.6□□□□□ -0.07
SPTLC1-207ENST00000488921 NACA2Q9H009 215 aa14.6□□□□□ -0.07
SPTLC1-207ENST00000488921 SMPD4Q9NXE4 827 aa14.6□□□□□ -0.07
SPTLC1-207ENST00000488921 GMIPQ9P107 970 aa14.6□□□□□ -0.07
SPTLC1-207ENST00000488921 TBC1D14Q9P2M4 693 aa14.6□□□□□ -0.07
SPTLC1-207ENST00000488921 RIF1Q5UIP0 2472 aaKnown RBP14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 ATG2BQ96BY7 2078 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 E2F8A0AVK6 867 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 BICDL2A1A5D9 508 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 TRIM49BA6NDI0 452 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 CHURC1-FNTBB4DL54 471 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 K7ESF4 209 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 COCHO43405 550 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 RNF40O75150 1001 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 BEST1O76090 585 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 EGFP01133 1207 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 ZDHHC11BP0C7U3 371 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 HOXA6P31267 233 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 GALK1P51570 392 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 PMS1P54277 932 aaKnown RBP14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 YWHAEP62258 255 aaKnown RBP14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 ZXDBP98169 803 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 FOXR2Q6PJQ5 311 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 FILIP1Q7Z7B0 1213 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 SEMA4DQ92854 862 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 ACDQ96AP0 544 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 CEP63Q96MT8 703 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 CISHQ9NSE2 258 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 CFAP97Q9P2B7 532 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 CHORDC1Q9UHD1 332 aaPredicted RBP14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 MAN1B1Q9UKM7 699 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 SCML2Q9UQR0 700 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 COQ4Q9Y3A0 265 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 SH3BP1Q9Y3L3 701 aa14.59□□□□□ -0.07
SPTLC1-207ENST00000488921 TLR5O60602 858 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 ADH1CP00326 375 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 CYP17A1P05093 508 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 PSEN1P49768 467 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 SLC8A3P57103 927 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 GOLGA8FQ08AF8 430 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 GOLGA8DPQ0D2H9 430 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 CCDC40Q4G0X9 1142 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 CBWD6Q4V339 395 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 ZNF394Q53GI3 561 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 CBWD3Q5JTY5 395 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 CBWD5Q5RIA9 395 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 GPR161Q8N6U8 529 aaKnown RBP14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 WHAMMQ8TF30 809 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 SLC35C1Q96A29 364 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 TMEM176AQ96HP8 235 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 DUSP9Q99956 384 aaKnown RBP14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 DUSP16Q9BY84 665 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 LINC00597Q9H2U6 94 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 CCSER2Q9H7U1 834 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 CHMP5Q9NZZ3 219 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 GMEB2Q9UKD1 530 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 SLC8A2Q9UPR5 921 aa14.58□□□□□ -0.08
SPTLC1-207ENST00000488921 PTPRZ1P23471 2315 aaPredicted RBP14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 EML5Q05BV3 1969 aa14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 CCDC163A0A0D9SF12 145 aa14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 ACO1P21399 889 aaKnown RBP14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 TBXAS1P24557 533 aaPredicted RBP14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 EIF2DP41214 584 aaKnown RBP14.57□□□□□ -0.08
SPTLC1-207ENST00000488921 FNTBP49356 437 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms