RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 E2F7Q96AV8 911 aa19.68■□□□□ 0.74
PTCD3-217ENST00000488801 SLC22A12Q96S37 553 aa19.68■□□□□ 0.74
PTCD3-217ENST00000488801 SLITRK6Q9H5Y7 841 aa19.68■□□□□ 0.74
PTCD3-217ENST00000488801 EPHX3Q9H6B9 360 aa19.68■□□□□ 0.74
PTCD3-217ENST00000488801 ZFP14Q9HCL3 533 aa19.68■□□□□ 0.74
PTCD3-217ENST00000488801 C11orf16Q9NQ32 467 aa19.68■□□□□ 0.74
PTCD3-217ENST00000488801 SLC2A4RGQ9NR83 387 aa19.68■□□□□ 0.74
PTCD3-217ENST00000488801 TRPM5Q9NZQ8 1165 aa19.68■□□□□ 0.74
PTCD3-217ENST00000488801 NARSO43776 548 aaKnown RBP19.67■□□□□ 0.74
PTCD3-217ENST00000488801 GABBR2O75899 941 aa19.67■□□□□ 0.74
PTCD3-217ENST00000488801 SRFP11831 508 aa19.67■□□□□ 0.74
PTCD3-217ENST00000488801 TCF3P15923 654 aa19.67■□□□□ 0.74
PTCD3-217ENST00000488801 VIPR2P41587 438 aa19.67■□□□□ 0.74
PTCD3-217ENST00000488801 PGFP49763 221 aa19.67■□□□□ 0.74
PTCD3-217ENST00000488801 FCHO2Q0JRZ9 810 aa19.67■□□□□ 0.74
PTCD3-217ENST00000488801 USP4Q13107 963 aa19.67■□□□□ 0.74
PTCD3-217ENST00000488801 BHLHA9Q7RTU4 235 aa19.67■□□□□ 0.74
PTCD3-217ENST00000488801 SCML4Q8N228 414 aa19.67■□□□□ 0.74
PTCD3-217ENST00000488801 RIN3Q8TB24 985 aa19.67■□□□□ 0.74
PTCD3-217ENST00000488801 ZNF606Q8WXB4 792 aa19.67■□□□□ 0.74
PTCD3-217ENST00000488801 USP13Q92995 863 aaPredicted RBP19.67■□□□□ 0.74
PTCD3-217ENST00000488801 LRRC3BQ96PB8 259 aa19.67■□□□□ 0.74
PTCD3-217ENST00000488801 STK33Q9BYT3 514 aa19.67■□□□□ 0.74
PTCD3-217ENST00000488801 KIF9Q9HAQ2 790 aa19.67■□□□□ 0.74
PTCD3-217ENST00000488801 GMIPQ9P107 970 aa19.67■□□□□ 0.74
PTCD3-217ENST00000488801 HESX1Q9UBX0 185 aa19.67■□□□□ 0.74
PTCD3-217ENST00000488801 M0QYV0 167 aa19.66■□□□□ 0.74
PTCD3-217ENST00000488801 ARNTLO00327 626 aa19.66■□□□□ 0.74
PTCD3-217ENST00000488801 CYP26A1O43174 497 aa19.66■□□□□ 0.74
PTCD3-217ENST00000488801 GPD2P43304 727 aa19.66■□□□□ 0.74
PTCD3-217ENST00000488801 SIGLEC14Q08ET2 396 aa19.66■□□□□ 0.74
PTCD3-217ENST00000488801 IFRD2Q12894 506 aaPredicted RBP19.66■□□□□ 0.74
PTCD3-217ENST00000488801 PM20D1Q6GTS8 502 aa19.66■□□□□ 0.74
PTCD3-217ENST00000488801 MFSD6LQ8IWD5 586 aa19.66■□□□□ 0.74
PTCD3-217ENST00000488801 DEPDC1BQ8WUY9 529 aa19.66■□□□□ 0.74
PTCD3-217ENST00000488801 SECISBP2LQ93073 1101 aaKnown RBP19.66■□□□□ 0.74
PTCD3-217ENST00000488801 ASIC4Q96FT7 647 aa19.66■□□□□ 0.74
PTCD3-217ENST00000488801 NAP1L5Q96NT1 182 aaPredicted RBP19.66■□□□□ 0.74
PTCD3-217ENST00000488801 TSPY26PQ9H489 355 aa19.66■□□□□ 0.74
PTCD3-217ENST00000488801 CYLDQ9NQC7 956 aa19.66■□□□□ 0.74
PTCD3-217ENST00000488801 FAM207AQ9NSI2 230 aaPredicted RBP19.66■□□□□ 0.74
PTCD3-217ENST00000488801 PCDHGC3Q9UN70 934 aa19.66■□□□□ 0.74
PTCD3-217ENST00000488801 CCL26Q9Y258 94 aa19.66■□□□□ 0.74
PTCD3-217ENST00000488801 TRAV19A0A0A6YYK7 116 aa19.65■□□□□ 0.74
PTCD3-217ENST00000488801 A0A1W2PQC6 194 aa19.65■□□□□ 0.74
PTCD3-217ENST00000488801 HEPACAM2A8MVW5 462 aa19.65■□□□□ 0.74
PTCD3-217ENST00000488801 CFHP08603 1231 aa19.65■□□□□ 0.74
PTCD3-217ENST00000488801 PBX1P40424 430 aa19.65■□□□□ 0.74
PTCD3-217ENST00000488801 PDE6CP51160 858 aa19.65■□□□□ 0.74
PTCD3-217ENST00000488801 SLC7A9P82251 487 aa19.65■□□□□ 0.74
PTCD3-217ENST00000488801 RAPGEF1Q13905 1077 aa19.65■□□□□ 0.74
PTCD3-217ENST00000488801 NR1I3Q14994 352 aa19.65■□□□□ 0.74
PTCD3-217ENST00000488801 PMF1Q6P1K2 205 aa19.65■□□□□ 0.74
PTCD3-217ENST00000488801 SLC47A2Q86VL8 602 aa19.65■□□□□ 0.74
PTCD3-217ENST00000488801 ZNF276Q8N554 614 aa19.65■□□□□ 0.74
PTCD3-217ENST00000488801 UBA3Q8TBC4 463 aa19.65■□□□□ 0.74
PTCD3-217ENST00000488801 OSER1Q9NX31 292 aa19.65■□□□□ 0.74
PTCD3-217ENST00000488801 ARHGAP26Q9UNA1 814 aa19.65■□□□□ 0.74
PTCD3-217ENST00000488801 THAP12O43422 761 aa19.64■□□□□ 0.73
PTCD3-217ENST00000488801 MED7O43513 233 aa19.64■□□□□ 0.73
PTCD3-217ENST00000488801 USP17L7P0C7H9 530 aa19.64■□□□□ 0.73
PTCD3-217ENST00000488801 PSMC3P17980 439 aa19.64■□□□□ 0.73
PTCD3-217ENST00000488801 AVPR1AP37288 418 aa19.64■□□□□ 0.73
PTCD3-217ENST00000488801 SLC8A3P57103 927 aa19.64■□□□□ 0.73
PTCD3-217ENST00000488801 POLR2FP61218 127 aaKnown RBP19.64■□□□□ 0.73
PTCD3-217ENST00000488801 ZXDBP98169 803 aa19.64■□□□□ 0.73
PTCD3-217ENST00000488801 FANCCQ00597 558 aa19.64■□□□□ 0.73
PTCD3-217ENST00000488801 ZNF77Q15935 545 aa19.64■□□□□ 0.73
PTCD3-217ENST00000488801 TRIM67Q6ZTA4 783 aa19.64■□□□□ 0.73
PTCD3-217ENST00000488801 SCD5Q86SK9 330 aa19.64■□□□□ 0.73
PTCD3-217ENST00000488801 CELF5Q8N6W0 485 aaKnown RBP19.64■□□□□ 0.73
PTCD3-217ENST00000488801 ARL14EPQ8N8R7 260 aaPredicted RBP19.64■□□□□ 0.73
PTCD3-217ENST00000488801 DDX1Q92499 740 aaKnown RBP19.64■□□□□ 0.73
PTCD3-217ENST00000488801 ZFRQ96KR1 1074 aaKnown RBP19.64■□□□□ 0.73
PTCD3-217ENST00000488801 RNF38Q9H0F5 515 aa19.64■□□□□ 0.73
PTCD3-217ENST00000488801 SMG9Q9H0W8 520 aaKnown RBP19.64■□□□□ 0.73
PTCD3-217ENST00000488801 NMUR1Q9HB89 426 aa19.64■□□□□ 0.73
PTCD3-217ENST00000488801 TLR8Q9NR97 1041 aaKnown RBP19.64■□□□□ 0.73
PTCD3-217ENST00000488801 TDP1Q9NUW8 608 aa19.64■□□□□ 0.73
PTCD3-217ENST00000488801 CYTH4Q9UIA0 394 aa19.64■□□□□ 0.73
PTCD3-217ENST00000488801 PSEN1P49768 467 aa19.63■□□□□ 0.73
PTCD3-217ENST00000488801 TKTL1P51854 596 aa19.63■□□□□ 0.73
PTCD3-217ENST00000488801 PTK2Q05397 1052 aa19.63■□□□□ 0.73
PTCD3-217ENST00000488801 ADIGQ0VDE8 80 aa19.63■□□□□ 0.73
PTCD3-217ENST00000488801 DENND1BQ6P3S1 775 aa19.63■□□□□ 0.73
PTCD3-217ENST00000488801 KIAA1958Q8N8K9 716 aa19.63■□□□□ 0.73
PTCD3-217ENST00000488801 EPS8L1Q8TE68 723 aa19.63■□□□□ 0.73
PTCD3-217ENST00000488801 STK32AQ8WU08 396 aa19.63■□□□□ 0.73
PTCD3-217ENST00000488801 HSFY1Q96LI6 401 aa19.63■□□□□ 0.73
PTCD3-217ENST00000488801 CYP2S1Q96SQ9 504 aa19.63■□□□□ 0.73
PTCD3-217ENST00000488801 SLC4A5Q9BY07 1137 aa19.63■□□□□ 0.73
PTCD3-217ENST00000488801 TTYH3Q9C0H2 523 aa19.63■□□□□ 0.73
PTCD3-217ENST00000488801 TRPC7Q9HCX4 862 aa19.63■□□□□ 0.73
PTCD3-217ENST00000488801 TRPV5Q9NQA5 729 aa19.63■□□□□ 0.73
PTCD3-217ENST00000488801 CHORDC1Q9UHD1 332 aaPredicted RBP19.63■□□□□ 0.73
PTCD3-217ENST00000488801 COCHO43405 550 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 CKMP06732 381 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 CYP11B1P15538 503 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 HDCP19113 662 aa19.62■□□□□ 0.73
PTCD3-217ENST00000488801 CDH5P33151 784 aaPredicted RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms