RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 NOL7Q9UMY1 257 aaKnown RBP9.91□□□□□ -0.82
COL17A1-207ENST00000488320 AGAP1Q9UPQ3 857 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 PCDHB6Q9Y5E3 794 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 AK5Q9Y6K8 562 aa9.91□□□□□ -0.82
COL17A1-207ENST00000488320 MAST4O15021 2626 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 K7ENM7 598 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 TNFSF14O43557 240 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 JAK2O60674 1132 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 TULP3O75386 442 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 CHRM1P11229 460 aaPredicted RBP9.9□□□□□ -0.82
COL17A1-207ENST00000488320 NCAM1P13591 858 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 JUPP14923 745 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 BDNFP23560 247 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 PCSK1P29120 753 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 CD6P30203 668 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 EIF2S3P41091 472 aaKnown RBP9.9□□□□□ -0.82
COL17A1-207ENST00000488320 PPP3CCP48454 512 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 KCNC4Q03721 635 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 CFAP221Q4G0U5 840 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 TAF1BQ53T94 588 aaPredicted RBP9.9□□□□□ -0.82
COL17A1-207ENST00000488320 C6orf118Q5T5N4 469 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 DCAF12L1Q5VU92 463 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 EGFLAMQ63HQ2 1017 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 DHRS13Q6UX07 377 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 DENND5BQ6ZUT9 1274 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 GPR155Q7Z3F1 870 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 TMEM86AQ8N2M4 240 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 MYCT1Q8N699 235 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 C4orf32Q8N8J7 132 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 IGSF22Q8N9C0 903 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 SYT2Q8N9I0 419 aaPredicted RBP9.9□□□□□ -0.82
COL17A1-207ENST00000488320 NSUN7Q8NE18 718 aaKnown RBP9.9□□□□□ -0.82
COL17A1-207ENST00000488320 SCFD1Q8WVM8 642 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 DNASE2BQ8WZ79 361 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 TOE1Q96GM8 510 aaKnown RBP9.9□□□□□ -0.82
COL17A1-207ENST00000488320 FUBP3Q96I24 572 aaKnown RBP eCLIP9.9□□□□□ -0.82
COL17A1-207ENST00000488320 PLIN2Q99541 437 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 GPR174Q9BXC1 333 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 SLC6A17Q9H1V8 727 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 CLMPQ9H6B4 373 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 CD93Q9NPY3 652 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 L1RE1Q9UN81 338 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 FNDC3AQ9Y2H6 1198 aaKnown RBP9.9□□□□□ -0.82
COL17A1-207ENST00000488320 SH3BP1Q9Y3L3 701 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 PCDHGB2Q9Y5G2 931 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 RAD54BQ9Y620 910 aa9.9□□□□□ -0.82
COL17A1-207ENST00000488320 NAV2Q8IVL1 2488 aa9.9□□□□□ -0.83
COL17A1-207ENST00000488320 TEX51A0A1B0GUA7 166 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 ZNF840PA6NDX5 716 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 BCAT2O15382 392 aaPredicted RBP9.89□□□□□ -0.83
COL17A1-207ENST00000488320 EPB41L2O43491 1005 aaKnown RBP9.89□□□□□ -0.83
COL17A1-207ENST00000488320 DKK1O94907 266 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 FAM13AO94988 1023 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 PLA2G4BP0C869 781 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 POLR2BP30876 1174 aaKnown RBP9.89□□□□□ -0.83
COL17A1-207ENST00000488320 MAGEA11P43364 429 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 LHX1P48742 406 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 USP46P62068 366 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 TFAMQ00059 246 aaKnown RBP9.89□□□□□ -0.83
COL17A1-207ENST00000488320 CYP27A1Q02318 531 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 IFRD2Q12894 506 aaPredicted RBP9.89□□□□□ -0.83
COL17A1-207ENST00000488320 SMAD1Q15797 465 aaKnown RBP9.89□□□□□ -0.83
COL17A1-207ENST00000488320 ME3Q16798 604 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 CCDC142Q17RM4 750 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 TDRD10Q5VZ19 366 aaKnown RBP9.89□□□□□ -0.83
COL17A1-207ENST00000488320 GRAMD4Q6IC98 578 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 VSTM1Q6UX27 236 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 DTHD1Q6ZMT9 781 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 MIB1Q86YT6 1006 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 PHTF2Q8N3S3 785 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 TERB1Q8NA31 727 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 BAHD1Q8TBE0 780 aaPredicted RBP9.89□□□□□ -0.83
COL17A1-207ENST00000488320 BAP1Q92560 729 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 GTF3C6Q969F1 213 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 OTUB2Q96DC9 234 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 NXPE2Q96DL1 559 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 CDK5RAP3Q96JB5 506 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 SPATA17Q96L03 361 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 ACOX2Q99424 681 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 ZHX3Q9H4I2 956 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 AGO2Q9UKV8 859 aaKnown RBP9.89□□□□□ -0.83
COL17A1-207ENST00000488320 BTBD3Q9Y2F9 522 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 STARD13Q9Y3M8 1113 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 R3HCC1Q9Y3T6 440 aaKnown RBP9.89□□□□□ -0.83
COL17A1-207ENST00000488320 SNX9Q9Y5X1 595 aa9.89□□□□□ -0.83
COL17A1-207ENST00000488320 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.88□□□□□ -0.83
COL17A1-207ENST00000488320 A0A1B0GVT2 93 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 E2F8A0AVK6 867 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 ANKRD63C9JTQ0 380 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 TRIM24O15164 1050 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 HCRTO43612 131 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 TLX3O43711 291 aaPredicted RBP9.88□□□□□ -0.83
COL17A1-207ENST00000488320 ATP2C2O75185 946 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 IL18RAPO95256 599 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 PIGRP01833 764 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 ITGB3P05106 788 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 KRT19P08727 400 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 PLCG1P19174 1290 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 SCP2P22307 547 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 HNF1BP35680 557 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms