RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 SLITRK1Q96PX8 696 aa11.61□□□□□ -0.55
HDLBP-242ENST00000488013 ALS2CR12Q96Q35 445 aa11.61□□□□□ -0.55
HDLBP-242ENST00000488013 CDK5RAP1Q96SZ6 601 aaKnown RBP11.61□□□□□ -0.55
HDLBP-242ENST00000488013 KCNK16Q96T55 309 aa11.61□□□□□ -0.55
HDLBP-242ENST00000488013 LPIN3Q9BQK8 851 aa11.61□□□□□ -0.55
HDLBP-242ENST00000488013 THAP2Q9H0W7 228 aa11.61□□□□□ -0.55
HDLBP-242ENST00000488013 NSUN3Q9H649 340 aaKnown RBP11.61□□□□□ -0.55
HDLBP-242ENST00000488013 DZANK1Q9NVP4 752 aa11.61□□□□□ -0.55
HDLBP-242ENST00000488013 ZDHHC7Q9NXF8 308 aa11.61□□□□□ -0.55
HDLBP-242ENST00000488013 RRN3Q9NYV6 651 aa11.61□□□□□ -0.55
HDLBP-242ENST00000488013 IL37Q9NZH6 218 aa11.61□□□□□ -0.55
HDLBP-242ENST00000488013 CTTNBP2NLQ9P2B4 639 aa11.61□□□□□ -0.55
HDLBP-242ENST00000488013 SCML2Q9UQR0 700 aa11.61□□□□□ -0.55
HDLBP-242ENST00000488013 REXO2Q9Y3B8 237 aaKnown RBP11.61□□□□□ -0.55
HDLBP-242ENST00000488013 INSL5Q9Y5Q6 135 aa11.61□□□□□ -0.55
HDLBP-242ENST00000488013 TDRD15B5MCY1 1934 aaKnown RBP11.6□□□□□ -0.55
HDLBP-242ENST00000488013 FAM92AA1XBS5 289 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 HHLA1C9JL84 531 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 KIF2AO00139 706 aaPredicted RBP11.6□□□□□ -0.55
HDLBP-242ENST00000488013 MYO1FO00160 1098 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 TNFRSF10BO14763 440 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 CLASP2O75122 1294 aaKnown RBP11.6□□□□□ -0.55
HDLBP-242ENST00000488013 XYLBO75191 536 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 ERBB2P04626 1255 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 POU3F3P20264 500 aaPredicted RBP11.6□□□□□ -0.55
HDLBP-242ENST00000488013 RRM1P23921 792 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 YWHAQP27348 245 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 NOP2P46087 812 aaKnown RBP11.6□□□□□ -0.55
HDLBP-242ENST00000488013 RGS7P49802 495 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 NAP1L1P55209 391 aaKnown RBP11.6□□□□□ -0.55
HDLBP-242ENST00000488013 MRPS5P82675 430 aaKnown RBP11.6□□□□□ -0.55
HDLBP-242ENST00000488013 ADIGQ0VDE8 80 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 MAMLD1Q13495 774 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 ACAP1Q15027 740 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 DUSP6Q16828 381 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 DDR2Q16832 855 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 ZNF697Q5TEC3 545 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 OR6B2Q6IFH4 312 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 XYLT1Q86Y38 959 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 SCUBE3Q8IX30 993 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 HS6ST3Q8IZP7 471 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 CASP10Q92851 521 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 TRMT2BQ96GJ1 504 aaKnown RBP11.6□□□□□ -0.55
HDLBP-242ENST00000488013 ZNF512Q96ME7 567 aaPredicted RBP11.6□□□□□ -0.55
HDLBP-242ENST00000488013 TTLL2Q9BWV7 592 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 CERS4Q9HA82 394 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 CYTH4Q9UIA0 394 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 ZMYM5Q9UJ78 669 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 SLC27A5Q9Y2P5 690 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 YIPF1Q9Y548 306 aa11.6□□□□□ -0.55
HDLBP-242ENST00000488013 PDE4DIPQ5VU43 2346 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 SOBPA7XYQ1 873 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 PAPSS1O43252 624 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-242ENST00000488013 ZMYND10O75800 440 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 BEST1O76090 585 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 C8AP07357 584 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 LCP1P13796 627 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 PFKLP17858 780 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 SSTR3P32745 418 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-242ENST00000488013 IRS1P35568 1242 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 SLC1A1P43005 524 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 YWHAZP63104 245 aaKnown RBP11.59□□□□□ -0.55
HDLBP-242ENST00000488013 PIGHQ14442 188 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-242ENST00000488013 CCDC142Q17RM4 750 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 PPM1LQ5SGD2 360 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 FAM102AQ5T9C2 384 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-242ENST00000488013 OLFML1Q6UWY5 402 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 ZNF276Q8N554 614 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 CMASQ8NFW8 434 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-242ENST00000488013 TRIM58Q8NG06 486 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-242ENST00000488013 SLC7A14Q8TBB6 771 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 SLC35G2Q8TBE7 412 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 FEZF2Q8TBJ5 459 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 ZNF564Q8TBZ8 553 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-242ENST00000488013 GDPD5Q8WTR4 605 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 SLC22A17Q8WUG5 538 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 PSMG2Q969U7 264 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 NUP85Q9BW27 656 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 RHOBTB2Q9BYZ6 727 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 POPDC2Q9HBU9 364 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 TLR8Q9NR97 1041 aaKnown RBP11.59□□□□□ -0.55
HDLBP-242ENST00000488013 CLIC5Q9NZA1 410 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 IP6K2Q9UHH9 426 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 STAP1Q9ULZ2 295 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 PYCARDQ9ULZ3 195 aa11.59□□□□□ -0.55
HDLBP-242ENST00000488013 TRIP11Q15643 1979 aa11.58□□□□□ -0.56
HDLBP-242ENST00000488013 SLC38A8A6NNN8 435 aa11.58□□□□□ -0.56
HDLBP-242ENST00000488013 TULP2O00295 520 aa11.58□□□□□ -0.56
HDLBP-242ENST00000488013 CAPN9O14815 690 aa11.58□□□□□ -0.56
HDLBP-242ENST00000488013 SEC24AO95486 1093 aa11.58□□□□□ -0.56
HDLBP-242ENST00000488013 VNN2O95498 520 aa11.58□□□□□ -0.56
HDLBP-242ENST00000488013 RALAP11233 206 aa11.58□□□□□ -0.56
HDLBP-242ENST00000488013 HOXB8P17481 243 aaPredicted RBP11.58□□□□□ -0.56
HDLBP-242ENST00000488013 TUBP50607 506 aa11.58□□□□□ -0.56
HDLBP-242ENST00000488013 CACNA2D1P54289 1103 aa11.58□□□□□ -0.56
HDLBP-242ENST00000488013 DAOAP59103 153 aa11.58□□□□□ -0.56
HDLBP-242ENST00000488013 TWF1Q12792 350 aa11.58□□□□□ -0.56
HDLBP-242ENST00000488013 MTA1Q13330 715 aa11.58□□□□□ -0.56
HDLBP-242ENST00000488013 CYP4A22Q5TCH4 519 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms