RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 CHORDC1Q9UHD1 332 aaPredicted RBP18■□□□□ 0.47
HMG20B-212ENST00000487894 TSPAN16Q9UKR8 245 aa18■□□□□ 0.47
HMG20B-212ENST00000487894 SIT1Q9Y3P8 196 aa18■□□□□ 0.47
HMG20B-212ENST00000487894 MTF2Q9Y483 593 aaPredicted RBP18■□□□□ 0.47
HMG20B-212ENST00000487894 PCDHB4Q9Y5E5 795 aa18■□□□□ 0.47
HMG20B-212ENST00000487894 MYOFQ9NZM1 2061 aa18■□□□□ 0.47
HMG20B-212ENST00000487894 RNF225M0QZC1 329 aaPredicted RBP17.99■□□□□ 0.47
HMG20B-212ENST00000487894 CYP26A1O43174 497 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 PAEPP09466 180 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 VDRP11473 427 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 CD19P15391 556 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 SOX9P48436 509 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 KIF11P52732 1056 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 MLLT6P55198 1093 aaPredicted RBP17.99■□□□□ 0.47
HMG20B-212ENST00000487894 TCF15Q12870 199 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 TRIM68Q6AZZ1 485 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 ZNF852Q6ZMS4 543 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 C11orf57Q6ZUT1 292 aaPredicted RBP17.99■□□□□ 0.47
HMG20B-212ENST00000487894 ZNF687Q8N1G0 1237 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 ANKRD52Q8NB46 1076 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 RBBP8NLQ8NC74 664 aaPredicted RBP17.99■□□□□ 0.47
HMG20B-212ENST00000487894 TTC8Q8TAM2 541 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 OSBPL6Q9BZF3 934 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 CCSER2Q9H7U1 834 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 GKN1Q9NS71 199 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 SAMSN1Q9NSI8 373 aaKnown RBP17.99■□□□□ 0.47
HMG20B-212ENST00000487894 TMEM63CQ9P1W3 806 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 SCML2Q9UQR0 700 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 NFE2L3Q9Y4A8 694 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 CPQQ9Y646 472 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 FANCMQ8IYD8 2048 aa17.99■□□□□ 0.47
HMG20B-212ENST00000487894 GTPBP10A4D1E9 387 aaKnown RBP17.98■□□□□ 0.47
HMG20B-212ENST00000487894 LEFTY2O00292 366 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 O00370 1275 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 COCHO43405 550 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 SLC9A1P19634 815 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 TUBP50607 506 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 ZNF132P52740 706 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 BCAT1P54687 386 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 MIIPQ5JXC2 388 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 SASS6Q6UVJ0 657 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 GBP6Q6ZN66 633 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 DTWD2Q8NBA8 298 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 TTC16Q8NEE8 873 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 ENOX1Q8TC92 643 aaKnown RBP17.98■□□□□ 0.47
HMG20B-212ENST00000487894 TFAP2BQ92481 460 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 MSANTD3Q96H12 275 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 ZSWIM1Q9BR11 485 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 TUBGCP2Q9BSJ2 902 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 TLR8Q9NR97 1041 aaKnown RBP17.98■□□□□ 0.47
HMG20B-212ENST00000487894 CACNA1HO95180 2353 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 CACNA1IQ9P0X4 2223 aa17.98■□□□□ 0.47
HMG20B-212ENST00000487894 FAM170BA6NMN3 283 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 KCNJ18B7U540 433 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 SPECC1L-ADORA2AF8WAN1 911 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 TULP2O00295 520 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 MAN2B1O00754 1011 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 CALCAP01258 141 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 MBL2P11226 248 aaPredicted RBP17.97■□□□□ 0.47
HMG20B-212ENST00000487894 ARSAP15289 507 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 CTHP32929 405 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 KPNA1P52294 538 aaPredicted RBP17.97■□□□□ 0.47
HMG20B-212ENST00000487894 APBA1Q02410 837 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 PDE4CQ08493 712 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 BST2Q10589 180 aaKnown RBP17.97■□□□□ 0.47
HMG20B-212ENST00000487894 KCNJ12Q14500 433 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 STX1AQ16623 288 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 EXOC3L4Q17RC7 722 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 ITPRIPL2Q3MIP1 535 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 RAB41Q5JT25 222 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 HECTD3Q5T447 861 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 CC2D1AQ6P1N0 951 aaPredicted RBP17.97■□□□□ 0.47
HMG20B-212ENST00000487894 GJB7Q6PEY0 223 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 TXNDC11Q6PKC3 985 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 PIGZQ86VD9 579 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 OSCP1Q8WVF1 389 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 FAM3CQ92520 227 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 ZFRQ96KR1 1074 aaKnown RBP17.97■□□□□ 0.47
HMG20B-212ENST00000487894 UBXN6Q9BZV1 441 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 NDST4Q9H3R1 872 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 EBF3Q9H4W6 596 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 C8orf33Q9H7E9 229 aaPredicted RBP17.97■□□□□ 0.47
HMG20B-212ENST00000487894 NMUR1Q9HB89 426 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 UBE2TQ9NPD8 197 aaPredicted RBP17.97■□□□□ 0.47
HMG20B-212ENST00000487894 OSER1Q9NX31 292 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 SMPD4Q9NXE4 827 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 APEX2Q9UBZ4 518 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 KIAA1257Q9ULG3 409 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 NDRG2Q9UN36 371 aaKnown RBP17.97■□□□□ 0.47
HMG20B-212ENST00000487894 CNTN6Q9UQ52 1028 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 MRPS17Q9Y2R5 130 aaKnown RBP17.97■□□□□ 0.47
HMG20B-212ENST00000487894 WNT6Q9Y6F9 365 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 USP3Q9Y6I4 520 aa17.97■□□□□ 0.47
HMG20B-212ENST00000487894 OTOL1A6NHN0 477 aaPredicted RBP17.96■□□□□ 0.47
HMG20B-212ENST00000487894 XPO1O14980 1071 aaKnown RBP17.96■□□□□ 0.47
HMG20B-212ENST00000487894 BRD2P25440 801 aaKnown RBP17.96■□□□□ 0.47
HMG20B-212ENST00000487894 PON1P27169 355 aa17.96■□□□□ 0.47
HMG20B-212ENST00000487894 PTPN5P54829 565 aa17.96■□□□□ 0.47
HMG20B-212ENST00000487894 FZD5Q13467 585 aa17.96■□□□□ 0.47
HMG20B-212ENST00000487894 RUNX3Q13761 415 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms