RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 FGFR4P22455 802 aa5.74□□□□□ -1.49
BRCA1-217ENST00000487825 TGM1P22735 817 aa5.74□□□□□ -1.49
BRCA1-217ENST00000487825 GCSHP23434 173 aa5.74□□□□□ -1.49
BRCA1-217ENST00000487825 KLRK1P26718 216 aa5.74□□□□□ -1.49
BRCA1-217ENST00000487825 FKBP1AP62942 108 aaKnown RBP5.74□□□□□ -1.49
BRCA1-217ENST00000487825 CXADRP78310 365 aa5.74□□□□□ -1.49
BRCA1-217ENST00000487825 AIMP1Q12904 312 aaKnown RBP5.74□□□□□ -1.49
BRCA1-217ENST00000487825 ACAP2Q15057 778 aa5.74□□□□□ -1.49
BRCA1-217ENST00000487825 CCDC152Q4G0S7 254 aa5.74□□□□□ -1.49
BRCA1-217ENST00000487825 SEM1Q6ZVN7 128 aa5.74□□□□□ -1.49
BRCA1-217ENST00000487825 GPR149Q86SP6 731 aa5.74□□□□□ -1.49
BRCA1-217ENST00000487825 LINC00476Q8WZB0 136 aa5.74□□□□□ -1.49
BRCA1-217ENST00000487825 COA7Q96BR5 231 aa5.74□□□□□ -1.49
BRCA1-217ENST00000487825 TMEM39BQ9GZU3 492 aa5.74□□□□□ -1.49
BRCA1-217ENST00000487825 GSTO2Q9H4Y5 243 aa5.74□□□□□ -1.49
BRCA1-217ENST00000487825 SYNPO2LQ9H987 977 aa5.74□□□□□ -1.49
BRCA1-217ENST00000487825 ZNF70Q9UC06 446 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-217ENST00000487825 KNSTRNQ9Y448 316 aa5.74□□□□□ -1.49
BRCA1-217ENST00000487825 PRRC2BQ5JSZ5 2229 aaKnown RBP5.74□□□□□ -1.49
BRCA1-217ENST00000487825 RPAP1Q9BWH6 1393 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-217ENST00000487825 ZAR1LA6NP61 321 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 PI4K2BG5E9Z4 385 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 MT-CO1P00395 513 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 SCAPQ12770 1279 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 AAK1Q2M2I8 961 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 ARMC6Q6NXE6 501 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 DPY19L2P1Q6NXN4 242 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 TRIB2Q92519 343 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 TIFAQ96CG3 184 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 MARS2Q96GW9 593 aaKnown RBP5.73□□□□□ -1.49
BRCA1-217ENST00000487825 Q96MF0 132 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 COQ10AQ96MF6 247 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 PUS7LQ9H0K6 701 aaKnown RBP5.73□□□□□ -1.49
BRCA1-217ENST00000487825 CD209Q9NNX6 404 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 MKS1Q9NXB0 559 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 FAM30AQ9NZY2 134 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 ATP8A1Q9Y2Q0 1164 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 MTO1Q9Y2Z2 717 aaKnown RBP5.73□□□□□ -1.49
BRCA1-217ENST00000487825 PKD1L2Q7Z442 2459 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 CACNA1GO43497 2377 aa5.73□□□□□ -1.49
BRCA1-217ENST00000487825 CDHR4A6H8M9 788 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 TRIM75PA6NK02 468 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 TCP10L2B9ZVM9 353 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 NDUFS2O75306 463 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 CKBP12277 381 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 EIF2S2P20042 333 aaKnown RBP5.72□□□□□ -1.49
BRCA1-217ENST00000487825 RBM5P52756 815 aaKnown RBP eCLIP5.72□□□□□ -1.49
BRCA1-217ENST00000487825 NOMO3P69849 1222 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 CREMQ03060 361 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 TFF2Q03403 129 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 NOMO2Q5JPE7 1267 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 FOXR2Q6PJQ5 311 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 CBARPQ8N350 705 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-217ENST00000487825 C1orf162Q8NEQ5 155 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-217ENST00000487825 PLBD2Q8NHP8 589 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 TBC1D15Q8TC07 691 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 JADE3Q92613 823 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 BADQ92934 168 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 NACC2Q96BF6 587 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 TMX1Q9H3N1 280 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 TDRD3Q9H7E2 651 aaKnown RBP5.72□□□□□ -1.49
BRCA1-217ENST00000487825 TUBD1Q9UJT1 453 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 GJD2Q9UKL4 321 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 SLC45A1Q9Y2W3 748 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 PCDHA13Q9Y5I0 950 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 KMT2EQ8IZD2 1858 aa5.72□□□□□ -1.49
BRCA1-217ENST00000487825 PLXNA3P51805 1871 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-217ENST00000487825 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-217ENST00000487825 IGSF3O75054 1194 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 ERN1O75460 977 aaKnown RBP5.71□□□□□ -1.5
BRCA1-217ENST00000487825 ESRRBO95718 433 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 ALAS1P13196 640 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 FDXRP22570 491 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 CXCR5P32302 372 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 MPLP40238 635 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 CLK3P49761 638 aaKnown RBP5.71□□□□□ -1.5
BRCA1-217ENST00000487825 BLOC1S1P78537 153 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 ATP8B2P98198 1209 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 FAM110CQ1W6H9 321 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 INAVAQ3KP66 663 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 RSPH3Q86UC2 560 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 FITM2Q8N6M3 262 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 SMCR8Q8TEV9 937 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-217ENST00000487825 HOOK2Q96ED9 719 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 FAXDC2Q96IV6 333 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 TMX3Q96JJ7 454 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 GALNT9Q9HCQ5 603 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 SAP30BPQ9UHR5 308 aaKnown RBP5.71□□□□□ -1.5
BRCA1-217ENST00000487825 COL4A4P53420 1690 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-217ENST00000487825 CFAP47Q6ZTR5 3102 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 SALL3Q9BXA9 1300 aa5.71□□□□□ -1.5
BRCA1-217ENST00000487825 CXCL11O14625 94 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 ERC2O15083 957 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 XPOTO43592 962 aaKnown RBP5.7□□□□□ -1.5
BRCA1-217ENST00000487825 MYBL2P10244 700 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 IL1R1P14778 569 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 TYRP1P17643 537 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 C5AR1P21730 350 aa5.7□□□□□ -1.5
BRCA1-217ENST00000487825 PTH2RP49190 550 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms