RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 FAM187AA6NFU0 413 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 NRP1O14786 923 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 SYN3O14994 580 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 TRAPPC3O43617 180 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 HSF2BPO75031 334 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 DAB1O75553 588 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 COILP38432 576 aaPredicted RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 SLC11A1P49279 550 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 LBX1P52954 281 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 TSPY1Q01534 308 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 DR1Q01658 176 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 ADCY2Q08462 1091 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 SMC1AQ14683 1233 aaKnown RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 LLGL1Q15334 1064 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 MAPRE1Q15691 268 aaKnown RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 SMTNL2Q2TAL5 461 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 MAP9Q49MG5 647 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 TFDP3Q5H9I0 405 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 CCDC137Q6PK04 289 aaKnown RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 GPRIN1Q7Z2K8 1008 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 GSPT2Q8IYD1 628 aaKnown RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 MAGOHBQ96A72 148 aaKnown RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 PAWRQ96IZ0 340 aaKnown RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 KCNK16Q96T55 309 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 DDX23Q9BUQ8 820 aaKnown RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 HEMGNQ9BXL5 484 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 FUT8Q9BYC5 575 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 RHOBTB2Q9BYZ6 727 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 PLEKHA4Q9H4M7 779 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 ZWILCHQ9H900 591 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 LRRC4Q9HBW1 653 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 TMEM39AQ9NV64 488 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 EFR3BQ9Y2G0 817 aa9.89□□□□□ -0.83
SF3B1-211ENST00000487698 R3HDM2Q9Y2K5 976 aaKnown RBP9.89□□□□□ -0.83
SF3B1-211ENST00000487698 ATP8B1O43520 1251 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 ENDOD1O94919 500 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 FBXO21O94952 628 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 TFE3P19532 575 aaPredicted RBP9.88□□□□□ -0.83
SF3B1-211ENST00000487698 ECHS1P30084 290 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 CETN2P41208 172 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 MATKP42679 507 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 CARSP49589 748 aaKnown RBP9.88□□□□□ -0.83
SF3B1-211ENST00000487698 NDUFV1P49821 464 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 TKTL1P51854 596 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 CDR1P51861 262 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 HDAC4P56524 1084 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 ATP11AP98196 1134 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 MRPL58Q14197 206 aaKnown RBP9.88□□□□□ -0.83
SF3B1-211ENST00000487698 TRADDQ15628 312 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 KCNT1Q5JUK3 1230 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.88□□□□□ -0.839e-13■■■■■ 69.7
SF3B1-211ENST00000487698 BNIPLQ7Z465 357 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 JAMLQ86YT9 394 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 SIX6OS1Q8N1H7 587 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 LRRC43Q8N309 656 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 FAM172AQ8WUF8 416 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 NT5C3BQ969T7 300 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 RUNDC3BQ96NL0 473 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 SLC2A13Q96QE2 648 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 NCAPGQ9BPX3 1015 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 TMEM175Q9BSA9 504 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 TRIM51Q9BSJ1 452 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 DCLK3Q9C098 648 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 ZCWPW1Q9H0M4 648 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 PNPLA8Q9NP80 782 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 CHST7Q9NS84 486 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 PCSK1NQ9UHG2 260 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 KIAA1671Q9BY89 1806 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 GREB1Q4ZG55 1949 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 ZNF638Q14966 1978 aaKnown RBP9.88□□□□□ -0.83
SF3B1-211ENST00000487698 TBKBP1A7MCY6 615 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 MAP2K7O14733 419 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 TADA2AO75478 443 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 SASH3O75995 380 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 KRT10P13645 584 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 FGFR3P22607 806 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 KDELR1P24390 212 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 ARSEP51690 589 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 RABGGTBP53611 331 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 EPHB4P54760 987 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 DAOAP59103 153 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 YWHAZP63104 245 aaKnown RBP9.88□□□□□ -0.83
SF3B1-211ENST00000487698 CUL1Q13616 776 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 IKBKEQ14164 716 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 CDO1Q16878 200 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 OTUD1Q5VV17 481 aaPredicted RBP9.88□□□□□ -0.83
SF3B1-211ENST00000487698 BHLHA9Q7RTU4 235 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 SCML4Q8N228 414 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 TEKT4Q8WW24 435 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 C1orf54Q8WWF1 131 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 ATG4AQ8WYN0 398 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 NDRG1Q92597 394 aaKnown RBP9.88□□□□□ -0.83
SF3B1-211ENST00000487698 TBCBQ99426 244 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 COLEC11Q9BWP8 271 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 GPR62Q9BZJ7 368 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 ULBP1Q9BZM6 244 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 NGRNQ9NPE2 291 aaKnown RBP9.88□□□□□ -0.83
SF3B1-211ENST00000487698 DMAP1Q9NPF5 467 aaPredicted RBP9.88□□□□□ -0.83
SF3B1-211ENST00000487698 CNGB3Q9NQW8 809 aa9.88□□□□□ -0.83
SF3B1-211ENST00000487698 HOMER3Q9NSC5 361 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms