RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 STXBP5Q5T5C0 1151 aa13.43□□□□□ -0.26
PRDM2-208ENST00000487453 GPR158Q5T848 1215 aa13.43□□□□□ -0.26
PRDM2-208ENST00000487453 NAA35Q5VZE5 725 aa13.43□□□□□ -0.26
PRDM2-208ENST00000487453 TRIM72Q6ZMU5 477 aa13.43□□□□□ -0.26
PRDM2-208ENST00000487453 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.43□□□□□ -0.26
PRDM2-208ENST00000487453 NPAS3Q8IXF0 933 aa13.43□□□□□ -0.26
PRDM2-208ENST00000487453 KCTD13Q8WZ19 329 aa13.43□□□□□ -0.26
PRDM2-208ENST00000487453 SYN2Q92777 582 aaPredicted RBP13.43□□□□□ -0.26
PRDM2-208ENST00000487453 FGF13Q92913 245 aa13.43□□□□□ -0.26
PRDM2-208ENST00000487453 ACSF2Q96CM8 615 aaPredicted RBP13.43□□□□□ -0.26
PRDM2-208ENST00000487453 RPGRIP1Q96KN7 1286 aa13.43□□□□□ -0.26
PRDM2-208ENST00000487453 ASB2Q96Q27 587 aa13.43□□□□□ -0.26
PRDM2-208ENST00000487453 PHF7Q9BWX1 381 aaPredicted RBP13.43□□□□□ -0.26
PRDM2-208ENST00000487453 ULBP1Q9BZM6 244 aa13.43□□□□□ -0.26
PRDM2-208ENST00000487453 TLR8Q9NR97 1041 aaKnown RBP13.43□□□□□ -0.26
PRDM2-208ENST00000487453 ZNHIT6Q9NWK9 470 aaKnown RBP13.43□□□□□ -0.26
PRDM2-208ENST00000487453 CYTH4Q9UIA0 394 aa13.43□□□□□ -0.26
PRDM2-208ENST00000487453 COL6A3P12111 3177 aa13.43□□□□□ -0.26
PRDM2-208ENST00000487453 ZNF638Q14966 1978 aaKnown RBP13.43□□□□□ -0.26
PRDM2-208ENST00000487453 PRUNE2Q8WUY3 3088 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 MOSPD3O75425 235 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 ZBED1O96006 694 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 SERPING1P05155 500 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 TNFAIP3P21580 790 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 CDC25BP30305 580 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 PRKCIP41743 596 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 ACADSBP45954 432 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 TBX2Q13207 712 aaPredicted RBP13.42□□□□□ -0.26
PRDM2-208ENST00000487453 OTOP3Q7RTS5 596 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 CCDC186Q7Z3E2 898 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 TMEM150AQ86TG1 271 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 WDTC1Q8N5D0 677 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 SPC24Q8NBT2 197 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 MSANTD4Q8NCY6 345 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 OR8K1Q8NGG5 319 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 STK32AQ8WU08 396 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 CPA5Q8WXQ8 436 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 OVCA2Q8WZ82 227 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 MCRS1Q96EZ8 462 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 PPP1R13BQ96KQ4 1090 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 HSFY1Q96LI6 401 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 MYADMQ96S97 322 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 CPXM1Q96SM3 734 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 DNAJC7Q99615 494 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.42□□□□□ -0.26
PRDM2-208ENST00000487453 CHORDC1Q9UHD1 332 aaPredicted RBP13.42□□□□□ -0.26
PRDM2-208ENST00000487453 NAGPAQ9UK23 515 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 CDH7Q9ULB5 785 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 SCML2Q9UQR0 700 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 NR2E1Q9Y466 385 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 NOTCH4Q99466 2003 aa13.42□□□□□ -0.26
PRDM2-208ENST00000487453 NUP210Q8TEM1 1887 aaPredicted RBP13.42□□□□□ -0.26
PRDM2-208ENST00000487453 DENND4CQ5VZ89 1909 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 A0A1W2PQH9 124 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 FAM92AA1XBS5 289 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 GOLGA6L6A8MZA4 724 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 CKMP06732 381 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 CDH5P33151 784 aaPredicted RBP13.41□□□□□ -0.26
PRDM2-208ENST00000487453 NSFP46459 744 aaKnown RBP13.41□□□□□ -0.26
PRDM2-208ENST00000487453 PPP3CCP48454 512 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 SNX16P57768 344 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 YWHAGP61981 247 aaKnown RBP eCLIP13.41□□□□□ -0.26
PRDM2-208ENST00000487453 PTPN20Q4JDL3 420 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 TXNDC8Q6A555 127 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 ZNF571Q7Z3V5 609 aaPredicted RBP13.41□□□□□ -0.26
PRDM2-208ENST00000487453 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.41□□□□□ -0.26
PRDM2-208ENST00000487453 VPS36Q86VN1 386 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 ERICH1Q86X53 443 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 ARHGAP18Q8N392 663 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 MAB21L3Q8N8X9 362 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 CLEC4CQ8WTT0 213 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 GOLGA1Q92805 767 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.41□□□□□ -0.26
PRDM2-208ENST00000487453 SLC4A5Q9BY07 1137 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 NACA2Q9H009 215 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 CNGB3Q9NQW8 809 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 IL37Q9NZH6 218 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 TJP2Q9UDY2 1190 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 BZW2Q9Y6E2 419 aaKnown RBP13.41□□□□□ -0.26
PRDM2-208ENST00000487453 USP3Q9Y6I4 520 aa13.41□□□□□ -0.26
PRDM2-208ENST00000487453 HELZP42694 1942 aaKnown RBP13.41□□□□□ -0.26
PRDM2-208ENST00000487453 NCANO14594 1321 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 TRAV19A0A0A6YYK7 116 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 C2orf78A6NCI8 922 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 ZNF840PA6NDX5 716 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 TMCO5BA8MYB1 307 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 C2CD4DB7Z1M9 353 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 GABBR2O75899 941 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 FBXO21O94952 628 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 ERBB2P04626 1255 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 CYP1A1P04798 512 aaPredicted RBP13.4□□□□□ -0.26
PRDM2-208ENST00000487453 PLEKP08567 350 aaPredicted RBP13.4□□□□□ -0.26
PRDM2-208ENST00000487453 DDX6P26196 483 aaKnown RBP eCLIP13.4□□□□□ -0.26
PRDM2-208ENST00000487453 AVPR1AP37288 418 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 DAOAP59103 153 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 CLEC16AQ2KHT3 1053 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 C2CD6Q53TS8 623 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 HGSNATQ68CP4 663 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 MON1AQ86VX9 555 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 ADHFE1Q8IWW8 467 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms