RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 TSSK4Q6SA08 328 aa15.29■□□□□ 0.04
CLDN11-207ENST00000486975 Q6ZS52 159 aa15.29■□□□□ 0.04
CLDN11-207ENST00000486975 ACOT1Q86TX2 421 aa15.29■□□□□ 0.04
CLDN11-207ENST00000486975 ZC3H3Q8IXZ2 948 aaKnown RBP15.29■□□□□ 0.04
CLDN11-207ENST00000486975 SMYD4Q8IYR2 804 aaPredicted RBP15.29■□□□□ 0.04
CLDN11-207ENST00000486975 RUBCNQ92622 972 aa15.29■□□□□ 0.04
CLDN11-207ENST00000486975 ELMO3Q96BJ8 720 aa15.29■□□□□ 0.04
CLDN11-207ENST00000486975 NIF3L1Q9GZT8 377 aa15.29■□□□□ 0.04
CLDN11-207ENST00000486975 FAM124BQ9H5Z6 455 aaPredicted RBP15.29■□□□□ 0.04
CLDN11-207ENST00000486975 ECT2Q9H8V3 914 aa15.29■□□□□ 0.04
CLDN11-207ENST00000486975 CSNK1G1Q9HCP0 422 aa15.29■□□□□ 0.04
CLDN11-207ENST00000486975 DUS2Q9NX74 493 aaKnown RBP15.29■□□□□ 0.04
CLDN11-207ENST00000486975 HOOK1Q9UJC3 728 aaKnown RBP15.29■□□□□ 0.04
CLDN11-207ENST00000486975 DMDP11532 3685 aa15.29■□□□□ 0.04
CLDN11-207ENST00000486975 CETN3O15182 167 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 SLC16A3O15427 465 aaKnown RBP15.28■□□□□ 0.04
CLDN11-207ENST00000486975 STX10O60499 249 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 AP1G2O75843 785 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 GJA4P35212 333 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 PRCPP42785 496 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 IFNAR2P48551 515 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 TUBP50607 506 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 SLC5A3P53794 718 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 SATB1Q01826 763 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 GRSF1Q12849 480 aaKnown RBP eCLIP15.28■□□□□ 0.04
CLDN11-207ENST00000486975 FSTL4Q6MZW2 842 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 KCNK16Q96T55 309 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 MED10Q9BTT4 135 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 APOBEC3GQ9HC16 384 aaKnown RBP15.28■□□□□ 0.04
CLDN11-207ENST00000486975 KRT82Q9NSB4 513 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 HMGXB4Q9UGU5 601 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 PCDHA5Q9Y5H7 936 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 WNT6Q9Y6F9 365 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 VPS13AQ96RL7 3174 aa15.28■□□□□ 0.04
CLDN11-207ENST00000486975 ZNF292O60281 2723 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 K7ESF4 209 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 LEFTY2O00292 366 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 NFATC1O95644 943 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 ZDHHC11BP0C7U3 371 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 EPB41P11171 864 aaKnown RBP15.27■□□□□ 0.04
CLDN11-207ENST00000486975 DRD1P21728 446 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 ZXDBP98169 803 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 FKBP3Q00688 224 aaKnown RBP15.27■□□□□ 0.04
CLDN11-207ENST00000486975 LRRC63Q05C16 580 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 NR1H3Q13133 447 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 FBXO43Q4G163 708 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 DDX42Q86XP3 938 aaKnown RBP eCLIP15.27■□□□□ 0.04
CLDN11-207ENST00000486975 TTC39CQ8N584 583 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 CCDC150Q8NCX0 1101 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 FBXL13Q8NEE6 735 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 ZMIZ2Q8NF64 920 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 SLC2A14Q8TDB8 520 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 SMARCE1Q969G3 411 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 FBXO32Q969P5 355 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 HNRNPABQ99729 332 aaKnown RBP15.27■□□□□ 0.04
CLDN11-207ENST00000486975 TSG101Q99816 390 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 SMOQ99835 787 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 DUSP9Q99956 384 aaKnown RBP15.27■□□□□ 0.04
CLDN11-207ENST00000486975 P2RY13Q9BPV8 354 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 NT5C1AQ9BXI3 368 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 DNAI2Q9GZS0 605 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 RNF38Q9H0F5 515 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 PNPLA8Q9NP80 782 aa15.27■□□□□ 0.04
CLDN11-207ENST00000486975 ZNF638Q14966 1978 aaKnown RBP15.27■□□□□ 0.03
CLDN11-207ENST00000486975 HELZP42694 1942 aaKnown RBP15.26■□□□□ 0.03
CLDN11-207ENST00000486975 CHURC1-FNTBB4DL54 471 aa15.26■□□□□ 0.03
CLDN11-207ENST00000486975 SLC9A3R1O14745 358 aaPredicted RBP15.26■□□□□ 0.03
CLDN11-207ENST00000486975 ATG13O75143 517 aa15.26■□□□□ 0.03
CLDN11-207ENST00000486975 CILPO75339 1184 aa15.26■□□□□ 0.03
CLDN11-207ENST00000486975 CCDC130P13994 396 aa15.26■□□□□ 0.03
CLDN11-207ENST00000486975 PPP1R2P41236 205 aa15.26■□□□□ 0.03
CLDN11-207ENST00000486975 MXI1P50539 228 aa15.26■□□□□ 0.03
CLDN11-207ENST00000486975 C12orf29Q8N999 325 aa15.26■□□□□ 0.03
CLDN11-207ENST00000486975 TWNKQ96RR1 684 aa15.26■□□□□ 0.03
CLDN11-207ENST00000486975 FBXO44Q9H4M3 255 aa15.26■□□□□ 0.03
CLDN11-207ENST00000486975 SMG5Q9UPR3 1016 aaKnown RBP15.26■□□□□ 0.03
CLDN11-207ENST00000486975 CPQQ9Y646 472 aa15.26■□□□□ 0.03
CLDN11-207ENST00000486975 CCDC163A0A0D9SF12 145 aa15.25■□□□□ 0.03
CLDN11-207ENST00000486975 FAM200BP0CF97 657 aa15.25■□□□□ 0.03
CLDN11-207ENST00000486975 CNR2P34972 360 aa15.25■□□□□ 0.03
CLDN11-207ENST00000486975 IFRD2Q12894 506 aaPredicted RBP15.25■□□□□ 0.03
CLDN11-207ENST00000486975 ORC1Q13415 861 aa15.25■□□□□ 0.03
CLDN11-207ENST00000486975 HECTD3Q5T447 861 aa15.25■□□□□ 0.03
CLDN11-207ENST00000486975 FOXR2Q6PJQ5 311 aa15.25■□□□□ 0.03
CLDN11-207ENST00000486975 LONP2Q86WA8 852 aa15.25■□□□□ 0.03
CLDN11-207ENST00000486975 SCAMP5Q8TAC9 235 aa15.25■□□□□ 0.03
CLDN11-207ENST00000486975 WHAMMQ8TF30 809 aa15.25■□□□□ 0.03
CLDN11-207ENST00000486975 CD101Q93033 1021 aa15.25■□□□□ 0.03
CLDN11-207ENST00000486975 ZDHHC16Q969W1 377 aa15.25■□□□□ 0.03
CLDN11-207ENST00000486975 EEF2KMTQ96G04 330 aa15.25■□□□□ 0.03
CLDN11-207ENST00000486975 LINC00597Q9H2U6 94 aa15.25■□□□□ 0.03
CLDN11-207ENST00000486975 FBRSL1Q9HCM7 1045 aaKnown RBP15.25■□□□□ 0.03
CLDN11-207ENST00000486975 FAM49BQ9NUQ9 324 aa15.25■□□□□ 0.03
CLDN11-207ENST00000486975 RAB20Q9NX57 234 aa15.25■□□□□ 0.03
CLDN11-207ENST00000486975 COQ4Q9Y3A0 265 aa15.25■□□□□ 0.03
CLDN11-207ENST00000486975 E2F8A0AVK6 867 aa15.24■□□□□ 0.03
CLDN11-207ENST00000486975 COCHO43405 550 aa15.24■□□□□ 0.03
CLDN11-207ENST00000486975 BEST1O76090 585 aa15.24■□□□□ 0.03
CLDN11-207ENST00000486975 ABL1P00519 1130 aa15.24■□□□□ 0.03
CLDN11-207ENST00000486975 EGFP01133 1207 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms