RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 OR1D2P34982 312 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 RACK1P63244 317 aaKnown RBP7.34□□□□□ -1.23
HDAC3-209ENST00000486618 SPIRE1Q08AE8 756 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 EPHA7Q15375 998 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 TANGO2Q6ICL3 276 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 GALNT17Q6IS24 598 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 ZNF449Q6P9G9 518 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 C1orf228Q6PIY5 440 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 Q6ZUG5 572 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 MAATS1Q7Z4T9 603 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 BLIDQ8IZY5 108 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 HASPINQ8TF76 798 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 ING5Q8WYH8 240 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 FAM3CQ92520 227 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 RABGGTAQ92696 567 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 BRF1Q92994 677 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 LXNQ9BS40 222 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 PLA2G2FQ9BZM2 168 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 ZFP14Q9HCL3 533 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 TRPV5Q9NQA5 729 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 HCFC1R1Q9NWW0 138 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 COL4A3Q01955 1670 aa7.34□□□□□ -1.23
HDAC3-209ENST00000486618 FASNP49327 2511 aaKnown RBP7.34□□□□□ -1.23
HDAC3-209ENST00000486618 VWA8A3KMH1 1905 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 CASTOR2A6NHX0 329 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 TM4SF5O14894 197 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 TRAPPC3O43617 180 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 GCFC2P16383 781 aaKnown RBP7.33□□□□□ -1.24
HDAC3-209ENST00000486618 EPHA1P21709 976 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 CDC25BP30305 580 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 LIMK1P53667 647 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 SHC2P98077 582 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 MBTD1Q05BQ5 628 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 MCL1Q07820 350 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 EIF2B5Q13144 721 aaKnown RBP7.33□□□□□ -1.24
HDAC3-209ENST00000486618 LRRC32Q14392 662 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 NTRK3Q16288 839 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 ADCK5Q3MIX3 580 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 AASDHQ4L235 1098 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-209ENST00000486618 COBLL1Q53SF7 1204 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 CYP4A22Q5TCH4 519 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 MZT2BQ6NZ67 158 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 MZT2AQ6P582 158 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 ANKS3Q6ZW76 656 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 CEP68Q76N32 757 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 MTERF4Q7Z6M4 381 aaKnown RBP7.33□□□□□ -1.24
HDAC3-209ENST00000486618 LONP2Q86WA8 852 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 AGGF1Q8N302 714 aaeCLIP7.33□□□□□ -1.24
HDAC3-209ENST00000486618 SPEM1Q8N4L4 309 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 C12orf50Q8NA57 414 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-209ENST00000486618 TTC16Q8NEE8 873 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 DEPDC1BQ8WUY9 529 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 ATP6V1E2Q96A05 226 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 MSANTD3Q96H12 275 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 CCDC43Q96MW1 224 aaKnown RBP7.33□□□□□ -1.24
HDAC3-209ENST00000486618 DEPDC7Q96QD5 511 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 PAAF1Q9BRP4 392 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 NFKBIZQ9BYH8 718 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 TRIM55Q9BYV6 548 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 ABCG4Q9H172 646 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 RMI1Q9H9A7 625 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 SH2B1Q9NRF2 756 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-209ENST00000486618 SNTG2Q9NY99 539 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 MTRRQ9UBK8 725 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 VAV3Q9UKW4 847 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 RRP15Q9Y3B9 282 aaKnown RBP7.33□□□□□ -1.24
HDAC3-209ENST00000486618 BACE2Q9Y5Z0 518 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 NID2Q14112 1375 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 GREB1Q4ZG55 1949 aa7.33□□□□□ -1.24
HDAC3-209ENST00000486618 ESYT3A0FGR9 886 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 ARHGEF37A1IGU5 675 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 SHISA7A6NL88 538 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 CHURC1-FNTBB4DL54 471 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 H0Y3Z8 333 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 PRRG1O14668 218 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 ZNF263O14978 683 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 ADAM12O43184 909 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 FZD6O60353 706 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 FAM13AO94988 1023 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 RASGRP1O95267 797 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 DEXIO95424 95 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 BAG4O95429 457 aaKnown RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 PROS1P07225 676 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 CCDC172P0C7W6 258 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 CEBPBP17676 345 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 PSMC3P17980 439 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 TNFAIP3P21580 790 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 GDI1P31150 447 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 STIP1P31948 543 aaKnown RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 ARL2P36404 184 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 UBA7P41226 1012 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 HTR3AP46098 478 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 FNTBP49356 437 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 ST13P50502 369 aaKnown RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 MLLT6P55198 1093 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 DMTNQ08495 405 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 SSRP1Q08945 709 aaKnown RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 STK3Q13188 491 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 CAPSQ13938 189 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 GRM2Q14416 872 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms