RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 ARCQ7LC44 396 aa21.3■■□□□ 1
HPS3-206ENST00000486530 RPAINQ86UA6 219 aa21.3■■□□□ 1
HPS3-206ENST00000486530 MAP7D3Q8IWC1 876 aa21.3■■□□□ 1
HPS3-206ENST00000486530 EPS8L3Q8TE67 593 aaKnown RBP21.3■■□□□ 1
HPS3-206ENST00000486530 FAM172AQ8WUF8 416 aa21.3■■□□□ 1
HPS3-206ENST00000486530 KHSRPQ92945 711 aaKnown RBP eCLIP21.3■■□□□ 1
HPS3-206ENST00000486530 TBCBQ99426 244 aa21.3■■□□□ 1
HPS3-206ENST00000486530 LPIN3Q9BQK8 851 aa21.3■■□□□ 1
HPS3-206ENST00000486530 NINJ2Q9NZG7 142 aa21.3■■□□□ 1
HPS3-206ENST00000486530 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.3■■□□□ 1
HPS3-206ENST00000486530 GABBR2O75899 941 aa21.29■■□□□ 1
HPS3-206ENST00000486530 ETS1P14921 441 aa21.29■■□□□ 1
HPS3-206ENST00000486530 CST5P28325 142 aaPredicted RBP21.29■■□□□ 1
HPS3-206ENST00000486530 ATP11AP98196 1134 aa21.29■■□□□ 1
HPS3-206ENST00000486530 TFDP2Q14188 446 aa21.29■■□□□ 1
HPS3-206ENST00000486530 PDK2Q15119 407 aa21.29■■□□□ 1
HPS3-206ENST00000486530 FAM47CQ5HY64 1035 aa21.29■■□□□ 1
HPS3-206ENST00000486530 SLC26A9Q7LBE3 791 aa21.29■■□□□ 1
HPS3-206ENST00000486530 VSIG1Q86XK7 387 aa21.29■■□□□ 1
HPS3-206ENST00000486530 BCAS4Q8TDM0 211 aa21.29■■□□□ 1
HPS3-206ENST00000486530 HSFY1Q96LI6 401 aa21.29■■□□□ 1
HPS3-206ENST00000486530 MAK16Q9BXY0 300 aaKnown RBP21.29■■□□□ 1
HPS3-206ENST00000486530 DNAJC17Q9NVM6 304 aaKnown RBP21.29■■□□□ 1
HPS3-206ENST00000486530 SHOC2Q9UQ13 582 aa21.29■■□□□ 1
HPS3-206ENST00000486530 MCF2LO15068 1137 aa21.28■■□□□ 1
HPS3-206ENST00000486530 PTPN9P43378 593 aa21.28■■□□□ 1
HPS3-206ENST00000486530 DPYSL3Q14195 570 aa21.28■■□□□ 1
HPS3-206ENST00000486530 PCGF5Q86SE9 256 aa21.28■■□□□ 1
HPS3-206ENST00000486530 B3GALNT2Q8NCR0 500 aa21.28■■□□□ 1
HPS3-206ENST00000486530 SLC2A14Q8TDB8 520 aa21.28■■□□□ 1
HPS3-206ENST00000486530 WNT8BQ93098 351 aa21.28■■□□□ 1
HPS3-206ENST00000486530 ZFP42Q96MM3 310 aa21.28■■□□□ 1
HPS3-206ENST00000486530 NGRNQ9NPE2 291 aaKnown RBP21.28■■□□□ 1
HPS3-206ENST00000486530 SAE1Q9UBE0 346 aaPredicted RBP21.28■■□□□ 1
HPS3-206ENST00000486530 SMIM23A6NLE4 172 aa21.28■■□□□ 1
HPS3-206ENST00000486530 IFNB1P01574 187 aa21.28■■□□□ 1
HPS3-206ENST00000486530 CHRNA1P02708 482 aa21.28■■□□□ 1
HPS3-206ENST00000486530 CTSHP09668 335 aa21.28■■□□□ 1
HPS3-206ENST00000486530 RDXP35241 583 aaKnown RBP21.28■■□□□ 1
HPS3-206ENST00000486530 MGAT3Q09327 533 aa21.28■■□□□ 1
HPS3-206ENST00000486530 KRT81Q14533 505 aa21.28■■□□□ 1
HPS3-206ENST00000486530 PTGISQ16647 500 aa21.28■■□□□ 1
HPS3-206ENST00000486530 KYNUQ16719 465 aa21.28■■□□□ 1
HPS3-206ENST00000486530 TNFAIP8L3Q5GJ75 292 aa21.28■■□□□ 1
HPS3-206ENST00000486530 RNASEH2BQ5TBB1 312 aaKnown RBP21.28■■□□□ 1
HPS3-206ENST00000486530 OSTM1Q86WC4 334 aa21.28■■□□□ 1
HPS3-206ENST00000486530 RSAD2Q8WXG1 361 aa21.28■■□□□ 1
HPS3-206ENST00000486530 PWWP2AQ96N64 755 aa21.28■■□□□ 1
HPS3-206ENST00000486530 SERPINB12Q96P63 405 aa21.28■■□□□ 1
HPS3-206ENST00000486530 RBM15Q96T37 977 aaKnown RBP eCLIP21.28■■□□□ 1
HPS3-206ENST00000486530 B3GNT5Q9BYG0 378 aa21.28■■□□□ 1
HPS3-206ENST00000486530 EPN3Q9H201 632 aa21.28■■□□□ 1
HPS3-206ENST00000486530 XPO1O14980 1071 aaKnown RBP21.27■■□□□ 1
HPS3-206ENST00000486530 MDM4O15151 490 aa21.27■■□□□ 1
HPS3-206ENST00000486530 GPR182O15218 404 aa21.27■■□□□ 1
HPS3-206ENST00000486530 AUHQ13825 339 aaKnown RBP21.27■■□□□ 1
HPS3-206ENST00000486530 RAB6CQ53S08 254 aa21.27■■□□□ 1
HPS3-206ENST00000486530 HNRNPABQ99729 332 aaKnown RBP21.27■■□□□ 1
HPS3-206ENST00000486530 RAB6CQ9H0N0 254 aa21.27■■□□□ 1
HPS3-206ENST00000486530 CENPFP49454 3210 aa21.27■□□□□ 0.99
HPS3-206ENST00000486530 CYB561D2O14569 222 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 TCEA3O75764 348 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 PECAM1P16284 738 aaPredicted RBP21.26■□□□□ 0.99
HPS3-206ENST00000486530 MLH1P40692 756 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 EIF3EP60228 445 aaKnown RBP21.26■□□□□ 0.99
HPS3-206ENST00000486530 SCYL2Q6P3W7 929 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.26■□□□□ 0.99
HPS3-206ENST00000486530 PXYLP1Q8TE99 480 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 TSPYL2Q9H2G4 693 aaPredicted RBP21.26■□□□□ 0.99
HPS3-206ENST00000486530 DDX20Q9UHI6 824 aaKnown RBP21.26■□□□□ 0.99
HPS3-206ENST00000486530 ZNF487B1APH4 448 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 ABHD2P08910 425 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 MAGEA4P43358 317 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 SLCO1A2P46721 670 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 SLC8A3P57103 927 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 MMRN1Q13201 1228 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 NOMO1Q15155 1222 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 GSTCDQ8NEC7 633 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 SPATA18Q8TC71 538 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 RAET1EQ8TD07 263 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 TTC25Q96NG3 672 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 RNF157Q96PX1 679 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 C11orf84Q9BUA3 381 aaPredicted RBP21.26■□□□□ 0.99
HPS3-206ENST00000486530 GIT1Q9Y2X7 761 aa21.26■□□□□ 0.99
HPS3-206ENST00000486530 MEIS3P2A8K0S8 358 aa21.25■□□□□ 0.99
HPS3-206ENST00000486530 GNRH1P01148 92 aa21.25■□□□□ 0.99
HPS3-206ENST00000486530 MYCNP04198 464 aaPredicted RBP21.25■□□□□ 0.99
HPS3-206ENST00000486530 THP07101 528 aa21.25■□□□□ 0.99
HPS3-206ENST00000486530 LCP1P13796 627 aa21.25■□□□□ 0.99
HPS3-206ENST00000486530 TKTP29401 623 aaKnown RBP21.25■□□□□ 0.99
HPS3-206ENST00000486530 ATP5DP30049 168 aa21.25■□□□□ 0.99
HPS3-206ENST00000486530 MMP13P45452 471 aa21.25■□□□□ 0.99
HPS3-206ENST00000486530 GDF10P55107 478 aa21.25■□□□□ 0.99
HPS3-206ENST00000486530 HDAC4P56524 1084 aa21.25■□□□□ 0.99
HPS3-206ENST00000486530 FOXR1Q6PIV2 292 aa21.25■□□□□ 0.99
HPS3-206ENST00000486530 TAOK1Q7L7X3 1001 aa21.25■□□□□ 0.99
HPS3-206ENST00000486530 CLEC4CQ8WTT0 213 aa21.25■□□□□ 0.99
HPS3-206ENST00000486530 CENPIQ92674 756 aaPredicted RBP21.25■□□□□ 0.99
HPS3-206ENST00000486530 GAD1Q99259 594 aa21.25■□□□□ 0.99
HPS3-206ENST00000486530 SNRNP25Q9BV90 132 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms