RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 RNF214Q8ND24 703 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 EZH1Q92800 747 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-226ENST00000486210 USP13Q92995 863 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-226ENST00000486210 MAGEC2Q9UBF1 373 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-226ENST00000486210 WASF3Q9UPY6 502 aa18.76■□□□□ 0.59
MCF2L-226ENST00000486210 VNN1O95497 513 aa18.75■□□□□ 0.59
MCF2L-226ENST00000486210 F11P03951 625 aa18.75■□□□□ 0.59
MCF2L-226ENST00000486210 ARSAP15289 507 aa18.75■□□□□ 0.59
MCF2L-226ENST00000486210 POLR2BP30876 1174 aaKnown RBP18.75■□□□□ 0.59
MCF2L-226ENST00000486210 GALK1P51570 392 aa18.75■□□□□ 0.59
MCF2L-226ENST00000486210 ZACNQ401N2 412 aa18.75■□□□□ 0.59
MCF2L-226ENST00000486210 SPPL2BQ8TCT7 592 aa18.75■□□□□ 0.59
MCF2L-226ENST00000486210 ELMO3Q96BJ8 720 aa18.75■□□□□ 0.59
MCF2L-226ENST00000486210 EDEM2Q9BV94 578 aa18.75■□□□□ 0.59
MCF2L-226ENST00000486210 TMEM121BQ9BXQ6 578 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-226ENST00000486210 TMEM8AQ9HCN3 771 aa18.75■□□□□ 0.59
MCF2L-226ENST00000486210 TAB2Q9NYJ8 693 aa18.75■□□□□ 0.59
MCF2L-226ENST00000486210 ZMIZ1Q9ULJ6 1067 aa18.75■□□□□ 0.59
MCF2L-226ENST00000486210 AGAP1Q9UPQ3 857 aa18.75■□□□□ 0.59
MCF2L-226ENST00000486210 R3HCC1Q9Y3T6 440 aaKnown RBP18.75■□□□□ 0.59
MCF2L-226ENST00000486210 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.75■□□□□ 0.59
MCF2L-226ENST00000486210 WDFY3Q8IZQ1 3526 aa18.75■□□□□ 0.59
MCF2L-226ENST00000486210 KRT19P08727 400 aa18.74■□□□□ 0.59
MCF2L-226ENST00000486210 HMGA1P17096 107 aaKnown RBP18.74■□□□□ 0.59
MCF2L-226ENST00000486210 GTF2H1P32780 548 aa18.74■□□□□ 0.59
MCF2L-226ENST00000486210 AP3M2P53677 418 aa18.74■□□□□ 0.59
MCF2L-226ENST00000486210 TSPY1Q01534 308 aa18.74■□□□□ 0.59
MCF2L-226ENST00000486210 KCNH2Q12809 1159 aa18.74■□□□□ 0.59
MCF2L-226ENST00000486210 BIRC3Q13489 604 aa18.74■□□□□ 0.59
MCF2L-226ENST00000486210 KRT31Q15323 416 aa18.74■□□□□ 0.59
MCF2L-226ENST00000486210 MIIPQ5JXC2 388 aa18.74■□□□□ 0.59
MCF2L-226ENST00000486210 UNQ6494/PRO21346Q6UXR6 183 aa18.74■□□□□ 0.59
MCF2L-226ENST00000486210 MAB21L3Q8N8X9 362 aa18.74■□□□□ 0.59
MCF2L-226ENST00000486210 STKLD1Q8NE28 680 aa18.74■□□□□ 0.59
MCF2L-226ENST00000486210 TUBGCP2Q9BSJ2 902 aa18.74■□□□□ 0.59
MCF2L-226ENST00000486210 ZMYM5Q9UJ78 669 aa18.74■□□□□ 0.59
MCF2L-226ENST00000486210 ITGA11Q9UKX5 1188 aa18.74■□□□□ 0.59
MCF2L-226ENST00000486210 ABCA7Q8IZY2 2146 aa18.74■□□□□ 0.59
MCF2L-226ENST00000486210 FAM208BQ5VWN6 2430 aa18.73■□□□□ 0.59
MCF2L-226ENST00000486210 C4orf47A7E2U8 309 aa18.73■□□□□ 0.59
MCF2L-226ENST00000486210 KPNA7A9QM74 516 aa18.73■□□□□ 0.59
MCF2L-226ENST00000486210 AFPP02771 609 aaKnown RBP18.73■□□□□ 0.59
MCF2L-226ENST00000486210 HAPLN1P10915 354 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-226ENST00000486210 HOXB3P14651 431 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-226ENST00000486210 EEF1GP26641 437 aaKnown RBP18.73■□□□□ 0.59
MCF2L-226ENST00000486210 AVPR1AP37288 418 aa18.73■□□□□ 0.59
MCF2L-226ENST00000486210 FMO5P49326 533 aa18.73■□□□□ 0.59
MCF2L-226ENST00000486210 MXI1P50539 228 aa18.73■□□□□ 0.59
MCF2L-226ENST00000486210 NOVA1P51513 510 aaKnown RBP18.73■□□□□ 0.59
MCF2L-226ENST00000486210 MAN2A1Q16706 1144 aa18.73■□□□□ 0.59
MCF2L-226ENST00000486210 WSCD1Q658N2 575 aa18.73■□□□□ 0.59
MCF2L-226ENST00000486210 TXNDC8Q6A555 127 aa18.73■□□□□ 0.59
MCF2L-226ENST00000486210 APTXQ7Z2E3 356 aaKnown RBP18.73■□□□□ 0.59
MCF2L-226ENST00000486210 RPLP0P6Q8NHW5 317 aa18.73■□□□□ 0.59
MCF2L-226ENST00000486210 TAS1R2Q8TE23 839 aa18.73■□□□□ 0.59
MCF2L-226ENST00000486210 SEMA4DQ92854 862 aa18.73■□□□□ 0.59
MCF2L-226ENST00000486210 RBSNQ9H1K0 784 aa18.73■□□□□ 0.59
MCF2L-226ENST00000486210 TDP1Q9NUW8 608 aa18.73■□□□□ 0.59
MCF2L-226ENST00000486210 ABI2Q9NYB9 513 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-226ENST00000486210 LIMA1Q9UHB6 759 aaKnown RBP18.73■□□□□ 0.59
MCF2L-226ENST00000486210 THADAQ6YHU6 1953 aa18.73■□□□□ 0.59
MCF2L-226ENST00000486210 PTPRDP23468 1912 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 ANAPC1Q9H1A4 1944 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 BCLAF3A2AJT9 711 aaKnown RBP18.72■□□□□ 0.59
MCF2L-226ENST00000486210 STX10O60499 249 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 PHACTR2O75167 634 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 TOP3BO95985 862 aaKnown RBP18.72■□□□□ 0.59
MCF2L-226ENST00000486210 HLA-DRAP01903 254 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 PRKCSHP14314 528 aaPredicted RBP18.72■□□□□ 0.59
MCF2L-226ENST00000486210 SPINK2P20155 84 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 CDK11BP21127 795 aaKnown RBP18.72■□□□□ 0.59
MCF2L-226ENST00000486210 DRD1P21728 446 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 GJA4P35212 333 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 GPR15P49685 360 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 MYL6P60660 151 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 RBP5P82980 135 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 CREB5Q02930 508 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 KRT39Q6A163 491 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 SYT13Q7L8C5 426 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 P2RY13Q9BPV8 354 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 VPS16Q9H269 839 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 KIF9Q9HAQ2 790 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.72■□□□□ 0.59
MCF2L-226ENST00000486210 PCDHB5Q9Y5E4 795 aa18.72■□□□□ 0.59
MCF2L-226ENST00000486210 CEP295Q9C0D2 2601 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 SPEGQ15772 3267 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 LNP1A1A4G5 178 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 HUS1O60921 280 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 TADA3O75528 432 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 COPB1P53618 953 aaKnown RBP18.71■□□□□ 0.59
MCF2L-226ENST00000486210 MYL7Q01449 175 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 ZNF252P-AS1Q0IIN9 211 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 FOXC1Q12948 553 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 NCOA4Q13772 614 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 COL9A2Q14055 689 aaPredicted RBP18.71■□□□□ 0.59
MCF2L-226ENST00000486210 DMC1Q14565 340 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 ELF2Q15723 593 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 NFE2Q16621 373 aaPredicted RBP18.71■□□□□ 0.59
MCF2L-226ENST00000486210 VWA3BQ502W6 1294 aa18.71■□□□□ 0.59
MCF2L-226ENST00000486210 KDF1Q8NAX2 398 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms