RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 DCP1BQ8IZD4 617 aaKnown RBP11.36□□□□□ -0.59
DDX56-212ENST00000485367 ADSSL1Q8N142 457 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 CXorf38Q8TB03 319 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.36□□□□□ -0.59
DDX56-212ENST00000485367 ELSPBP1Q96BH3 223 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 CCDC127Q96BQ5 260 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 SHDQ96IW2 340 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 CAPZA3Q96KX2 299 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 LRRC3Q9BY71 257 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 TTYH3Q9C0H2 523 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 IRF2BPLQ9H1B7 796 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 SLITRK6Q9H5Y7 841 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 ZFP14Q9HCL3 533 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 ABI2Q9NYB9 513 aaPredicted RBP11.36□□□□□ -0.59
DDX56-212ENST00000485367 TRIM10Q9UDY6 481 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 ASB3Q9Y575 518 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 SNX9Q9Y5X1 595 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 A0A1W2PRU2 124 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 KLHL33A6NCF5 533 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 CHUKO15111 745 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 DLATP10515 647 aaKnown RBP11.36□□□□□ -0.59
DDX56-212ENST00000485367 FCARP24071 287 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 VIPR2P41587 438 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 SNRPFP62306 86 aaKnown RBP11.36□□□□□ -0.59
DDX56-212ENST00000485367 SMARCB1Q12824 385 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 MYO1EQ12965 1108 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 GRM2Q14416 872 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 VEPH1Q14D04 833 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 SPA17Q15506 151 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 ZKSCAN8Q15776 578 aaPredicted RBP11.36□□□□□ -0.59
DDX56-212ENST00000485367 BMT2Q1RMZ1 405 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 SLC44A4Q53GD3 710 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 PHLDB3Q6NSJ2 640 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 ITIH5Q86UX2 942 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 TMC8Q8IU68 726 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 FAM114A1Q8IWE2 563 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 CCDC105Q8IYK2 499 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 TMEM86AQ8N2M4 240 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 MREGQ8N565 214 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 DTWD2Q8NBA8 298 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 XXYLT1Q8NBI6 393 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 ZSCAN18Q8TBC5 510 aaPredicted RBP11.36□□□□□ -0.59
DDX56-212ENST00000485367 GIPC2Q8TF65 315 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 C2orf15Q8WU43 125 aaKnown RBP11.36□□□□□ -0.59
DDX56-212ENST00000485367 SMARCD2Q92925 531 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 PSMG2Q969U7 264 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 SGSM3Q96HU1 749 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 HPDLQ96IR7 371 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 ASB16Q96NS5 453 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 ALS2CR12Q96Q35 445 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 LPIN3Q9BQK8 851 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 FOXQ1Q9C009 403 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 EPN3Q9H201 632 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 NHEJ1Q9H9Q4 299 aaPredicted RBP11.36□□□□□ -0.59
DDX56-212ENST00000485367 ZNF334Q9HCZ1 680 aaPredicted RBP11.36□□□□□ -0.59
DDX56-212ENST00000485367 EXOC1Q9NV70 894 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 DDX43Q9NXZ2 648 aaKnown RBP11.36□□□□□ -0.59
DDX56-212ENST00000485367 STIM2Q9P246 746 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 HSFX1Q9UBD0 423 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 SIT1Q9Y3P8 196 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 HYOU1Q9Y4L1 999 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 PCDHB5Q9Y5E4 795 aa11.36□□□□□ -0.59
DDX56-212ENST00000485367 H0YHG0 523 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 PDE2AO00408 941 aaPredicted RBP11.35□□□□□ -0.59
DDX56-212ENST00000485367 PSMA7O14818 248 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 KLRC4O43908 158 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 SRGAP2O75044 1071 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 DCNP07585 359 aaKnown RBP11.35□□□□□ -0.59
DDX56-212ENST00000485367 HAPLN1P10915 354 aaPredicted RBP11.35□□□□□ -0.59
DDX56-212ENST00000485367 TNNI1P19237 187 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 ACAT1P24752 427 aaKnown RBP11.35□□□□□ -0.59
DDX56-212ENST00000485367 HNRNPH3P31942 346 aaKnown RBP11.35□□□□□ -0.59
DDX56-212ENST00000485367 SSR1P43307 286 aaKnown RBP11.35□□□□□ -0.59
DDX56-212ENST00000485367 MYL7Q01449 175 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 CYP24A1Q07973 514 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 MLF2Q15773 248 aaPredicted RBP11.35□□□□□ -0.59
DDX56-212ENST00000485367 TAF12Q16514 161 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 KNOP1Q1ED39 458 aaKnown RBP11.35□□□□□ -0.59
DDX56-212ENST00000485367 TAX1BP1Q86VP1 789 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 IRF2BP1Q8IU81 584 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 GPIHBP1Q8IV16 184 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 WDR49Q8IV35 697 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 CCDC50Q8IVM0 306 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 TOP6BLQ8N6T0 577 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 SPATA4Q8NEY3 305 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 RNF217Q8TC41 542 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 FNBP1Q96RU3 617 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 GPR88Q9GZN0 384 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 TMLHEQ9NVH6 421 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 GDAP2Q9NXN4 497 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 CAPN7Q9Y6W3 813 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 COL4A3Q01955 1670 aa11.35□□□□□ -0.59
DDX56-212ENST00000485367 EXOC3O60645 756 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 ATF6P18850 670 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 GABRR2P28476 465 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 PRCPP42785 496 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 PAFAH1B1P43034 410 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 STARD6P59095 220 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 PRKCQQ04759 706 aa11.34□□□□□ -0.59
DDX56-212ENST00000485367 C2orf54Q08AI8 447 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms