RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 YJEFN3A6XGL0 299 aa15.27■□□□□ 0.04
LRIF1-202ENST00000485275 E7ENQ6 273 aa15.27■□□□□ 0.04
LRIF1-202ENST00000485275 PROSCO94903 275 aa15.27■□□□□ 0.04
LRIF1-202ENST00000485275 FYNP06241 537 aa15.27■□□□□ 0.04
LRIF1-202ENST00000485275 TFE3P19532 575 aaPredicted RBP15.27■□□□□ 0.04
LRIF1-202ENST00000485275 CASQ1P31415 396 aa15.27■□□□□ 0.04
LRIF1-202ENST00000485275 RNASE9P60153 205 aaKnown RBP15.27■□□□□ 0.04
LRIF1-202ENST00000485275 MRPS5P82675 430 aaKnown RBP15.27■□□□□ 0.04
LRIF1-202ENST00000485275 RAB33AQ14088 237 aa15.27■□□□□ 0.04
LRIF1-202ENST00000485275 IFI16Q16666 785 aaKnown RBP15.27■□□□□ 0.04
LRIF1-202ENST00000485275 MGAT5BQ3V5L5 792 aa15.27■□□□□ 0.04
LRIF1-202ENST00000485275 SH3PXD2AQ5TCZ1 1133 aa15.27■□□□□ 0.04
LRIF1-202ENST00000485275 DCUN1D2Q6PH85 259 aa15.27■□□□□ 0.04
LRIF1-202ENST00000485275 ZDHHC17Q8IUH5 632 aa15.27■□□□□ 0.04
LRIF1-202ENST00000485275 ZNF461Q8TAF7 563 aa15.27■□□□□ 0.04
LRIF1-202ENST00000485275 C8orf48Q96LL4 319 aa15.27■□□□□ 0.04
LRIF1-202ENST00000485275 NAPGQ99747 312 aaPredicted RBP15.27■□□□□ 0.04
LRIF1-202ENST00000485275 CERS4Q9HA82 394 aa15.27■□□□□ 0.04
LRIF1-202ENST00000485275 LZTS1Q9Y250 596 aa15.27■□□□□ 0.04
LRIF1-202ENST00000485275 JRKLQ9Y4A0 524 aa15.27■□□□□ 0.04
LRIF1-202ENST00000485275 PDE4DIPQ5VU43 2346 aa15.27■□□□□ 0.03
LRIF1-202ENST00000485275 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.26■□□□□ 0.03
LRIF1-202ENST00000485275 CAPN15O75808 1086 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 DNA2P51530 1060 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 MTMR3Q13615 1198 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 DNTTIP2Q5QJE6 756 aaKnown RBP15.26■□□□□ 0.03
LRIF1-202ENST00000485275 OTUD1Q5VV17 481 aaPredicted RBP15.26■□□□□ 0.03
LRIF1-202ENST00000485275 GPR65Q8IYL9 337 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 SIX6OS1Q8N1H7 587 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 KRT35Q92764 455 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 HES6Q96HZ4 224 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 CFAP57Q96MR6 1250 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 PSMB7Q99436 277 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 NKX2-4Q9H2Z4 354 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 CALCOCO1Q9P1Z2 691 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 FNIP2Q9P278 1114 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 AFF4Q9UHB7 1163 aaKnown RBP15.26■□□□□ 0.03
LRIF1-202ENST00000485275 RWDD3Q9Y3V2 267 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 MYO7AQ13402 2215 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 CTAGE9A4FU28 777 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 EPOPA6NHQ4 379 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 MYO1FO00160 1098 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 TRIM66O15016 1216 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 DDX3YO15523 660 aaKnown RBP15.26■□□□□ 0.03
LRIF1-202ENST00000485275 SRGAP2O75044 1071 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 ATF2P15336 505 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 SCNN1AP37088 669 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 TAS2R40P59535 323 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 ERVK-21P61565 698 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 PITX1P78337 314 aaPredicted RBP15.26■□□□□ 0.03
LRIF1-202ENST00000485275 SMARCB1Q12824 385 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 IFRD2Q12894 506 aaPredicted RBP15.26■□□□□ 0.03
LRIF1-202ENST00000485275 C15orf59Q2T9L4 293 aaPredicted RBP15.26■□□□□ 0.03
LRIF1-202ENST00000485275 DCAF12L1Q5VU92 463 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 PLPP4Q5VZY2 271 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 PAPD7Q5XG87 772 aaKnown RBP15.26■□□□□ 0.03
LRIF1-202ENST00000485275 PM20D1Q6GTS8 502 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 TMC7Q7Z402 723 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 PEX26Q7Z412 305 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 KIF18AQ8NI77 898 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 FNIP1Q8TF40 1166 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 C2orf15Q8WU43 125 aaKnown RBP15.26■□□□□ 0.03
LRIF1-202ENST00000485275 RXFP2Q8WXD0 754 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 TGS1Q96RS0 853 aaKnown RBP15.26■□□□□ 0.03
LRIF1-202ENST00000485275 C11orf84Q9BUA3 381 aaPredicted RBP15.26■□□□□ 0.03
LRIF1-202ENST00000485275 PRO3102Q9H379 93 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 CNGB3Q9NQW8 809 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 TLR9Q9NR96 1032 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 IRAK3Q9Y616 596 aa15.26■□□□□ 0.03
LRIF1-202ENST00000485275 C2orf71A6NGG8 1288 aa15.25■□□□□ 0.03
LRIF1-202ENST00000485275 FSCN2O14926 492 aa15.25■□□□□ 0.03
LRIF1-202ENST00000485275 CXCL14O95715 111 aa15.25■□□□□ 0.03
LRIF1-202ENST00000485275 ZBED1O96006 694 aa15.25■□□□□ 0.03
LRIF1-202ENST00000485275 TUBB4AP04350 444 aa15.25■□□□□ 0.03
LRIF1-202ENST00000485275 CA8P35219 290 aa15.25■□□□□ 0.03
LRIF1-202ENST00000485275 CCDC14Q49A88 953 aa15.25■□□□□ 0.03
LRIF1-202ENST00000485275 TXNRD3NBQ6F5E7 133 aa15.25■□□□□ 0.03
LRIF1-202ENST00000485275 SYCE1Q8N0S2 351 aa15.25■□□□□ 0.03
LRIF1-202ENST00000485275 NIPA2Q8N8Q9 360 aa15.25■□□□□ 0.03
LRIF1-202ENST00000485275 ALG3Q92685 438 aa15.25■□□□□ 0.03
LRIF1-202ENST00000485275 ENTPD7Q9NQZ7 604 aa15.25■□□□□ 0.03
LRIF1-202ENST00000485275 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.25■□□□□ 0.03
LRIF1-202ENST00000485275 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.24■□□□□ 0.03
LRIF1-202ENST00000485275 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.24■□□□□ 0.03
LRIF1-202ENST00000485275 ZNF185O15231 689 aa15.24■□□□□ 0.03
LRIF1-202ENST00000485275 TGM5O43548 720 aa15.24■□□□□ 0.03
LRIF1-202ENST00000485275 LRCH4O75427 683 aa15.24■□□□□ 0.03
LRIF1-202ENST00000485275 SPATA31D3P0C874 917 aa15.24■□□□□ 0.03
LRIF1-202ENST00000485275 GPD1P21695 349 aa15.24■□□□□ 0.03
LRIF1-202ENST00000485275 PSMA2P25787 234 aa15.24■□□□□ 0.03
LRIF1-202ENST00000485275 CXCR5P32302 372 aa15.24■□□□□ 0.03
LRIF1-202ENST00000485275 BMP8BP34820 402 aa15.24■□□□□ 0.03
LRIF1-202ENST00000485275 ZNF143P52747 638 aaPredicted RBP15.24■□□□□ 0.03
LRIF1-202ENST00000485275 SYPL2Q5VXT5 272 aa15.24■□□□□ 0.03
LRIF1-202ENST00000485275 TPGS2Q68CL5 300 aa15.24■□□□□ 0.03
LRIF1-202ENST00000485275 SPATA31D4Q6ZUB0 917 aa15.24■□□□□ 0.03
LRIF1-202ENST00000485275 GIPC2Q8TF65 315 aa15.24■□□□□ 0.03
LRIF1-202ENST00000485275 COG1Q8WTW3 980 aa15.24■□□□□ 0.03
LRIF1-202ENST00000485275 FAM149B1Q96BN6 582 aa15.24■□□□□ 0.03
LRIF1-202ENST00000485275 CALR3Q96L12 384 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms