RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 DNAJC12Q9UKB3 198 aa18.76■□□□□ 0.59
SREBF1-213ENST00000485080 ARHGAP26Q9UNA1 814 aa18.76■□□□□ 0.59
SREBF1-213ENST00000485080 C2orf78A6NCI8 922 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 ARNTLO00327 626 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 DPYSL4O14531 572 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 CHADO15335 359 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 UCHL3P15374 230 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 HDCP19113 662 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 PSEN1P49768 467 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 MLLT6P55198 1093 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-213ENST00000485080 PLCB2Q00722 1185 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 PDE4CQ08493 712 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 NFKBIBQ15653 356 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 PM20D1Q6GTS8 502 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 FAM71AQ8IYT1 594 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 SCML4Q8N228 414 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 BPIFB1Q8TDL5 484 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 SLC35F5Q8WV83 523 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 IRF7Q92985 503 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 ERGIC2Q96RQ1 377 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 SLC22A12Q96S37 553 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 TLR8Q9NR97 1041 aaKnown RBP18.75■□□□□ 0.59
SREBF1-213ENST00000485080 SIK3Q9Y2K2 1263 aa18.75■□□□□ 0.59
SREBF1-213ENST00000485080 ZNF318Q5VUA4 2279 aa18.74■□□□□ 0.59
SREBF1-213ENST00000485080 FOXN3O00409 490 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-213ENST00000485080 CKMP06732 381 aa18.74■□□□□ 0.59
SREBF1-213ENST00000485080 ATP1A3P13637 1013 aa18.74■□□□□ 0.59
SREBF1-213ENST00000485080 BRD2P25440 801 aaKnown RBP18.74■□□□□ 0.59
SREBF1-213ENST00000485080 RPL34P49207 117 aaKnown RBP18.74■□□□□ 0.59
SREBF1-213ENST00000485080 ARHGAP44Q17R89 818 aa18.74■□□□□ 0.59
SREBF1-213ENST00000485080 ARHGAP29Q52LW3 1261 aa18.74■□□□□ 0.59
SREBF1-213ENST00000485080 HECTD3Q5T447 861 aa18.74■□□□□ 0.59
SREBF1-213ENST00000485080 KLHDC10Q6PID8 442 aa18.74■□□□□ 0.59
SREBF1-213ENST00000485080 ARL14EPQ8N8R7 260 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-213ENST00000485080 ZNF606Q8WXB4 792 aa18.74■□□□□ 0.59
SREBF1-213ENST00000485080 HSFY1Q96LI6 401 aa18.74■□□□□ 0.59
SREBF1-213ENST00000485080 CYP2S1Q96SQ9 504 aa18.74■□□□□ 0.59
SREBF1-213ENST00000485080 STK33Q9BYT3 514 aa18.74■□□□□ 0.59
SREBF1-213ENST00000485080 TRPC7Q9HCX4 862 aa18.74■□□□□ 0.59
SREBF1-213ENST00000485080 CYLDQ9NQC7 956 aa18.74■□□□□ 0.59
SREBF1-213ENST00000485080 CLIC5Q9NZA1 410 aa18.74■□□□□ 0.59
SREBF1-213ENST00000485080 GMIPQ9P107 970 aa18.74■□□□□ 0.59
SREBF1-213ENST00000485080 CHORDC1Q9UHD1 332 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-213ENST00000485080 AJAP1Q9UKB5 411 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-213ENST00000485080 CCL26Q9Y258 94 aa18.74■□□□□ 0.59
SREBF1-213ENST00000485080 ZNF263O14978 683 aa18.73■□□□□ 0.59
SREBF1-213ENST00000485080 MED7O43513 233 aa18.73■□□□□ 0.59
SREBF1-213ENST00000485080 GNA15P30679 374 aa18.73■□□□□ 0.59
SREBF1-213ENST00000485080 GDI1P31150 447 aa18.73■□□□□ 0.59
SREBF1-213ENST00000485080 BPIFB4P59827 614 aa18.73■□□□□ 0.59
SREBF1-213ENST00000485080 PRKCQQ04759 706 aa18.73■□□□□ 0.59
SREBF1-213ENST00000485080 IFRD2Q12894 506 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-213ENST00000485080 STK32AQ8WU08 396 aa18.73■□□□□ 0.59
SREBF1-213ENST00000485080 LRFN3Q9BTN0 628 aa18.73■□□□□ 0.59
SREBF1-213ENST00000485080 LSM14BQ9BX40 385 aaKnown RBP18.73■□□□□ 0.59
SREBF1-213ENST00000485080 RNF38Q9H0F5 515 aa18.73■□□□□ 0.59
SREBF1-213ENST00000485080 GANQ9H2C0 597 aa18.73■□□□□ 0.59
SREBF1-213ENST00000485080 BRD9Q9H8M2 597 aa18.73■□□□□ 0.59
SREBF1-213ENST00000485080 CBX8Q9HC52 389 aa18.73■□□□□ 0.59
SREBF1-213ENST00000485080 THG1LQ9NWX6 298 aaKnown RBP18.73■□□□□ 0.59
SREBF1-213ENST00000485080 FBXL21Q9UKT6 434 aa18.73■□□□□ 0.59
SREBF1-213ENST00000485080 KIF26AQ9ULI4 1882 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-213ENST00000485080 KRBA1A5PL33 1030 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 TULP2O00295 520 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 CFHP08603 1231 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 GLULP15104 373 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 GPD2P43304 727 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 PTK2Q05397 1052 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 USP4Q13107 963 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 GRM2Q14416 872 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 DRAP1Q14919 205 aaPredicted RBP18.72■□□□□ 0.59
SREBF1-213ENST00000485080 ZNF77Q15935 545 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 HFE2Q6ZVN8 426 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 YAF2Q8IY57 180 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 ARHGAP18Q8N392 663 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 UBA3Q8TBC4 463 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 SHDQ96IW2 340 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 FAM83CQ9BQN1 747 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 DDX23Q9BUQ8 820 aaKnown RBP18.72■□□□□ 0.59
SREBF1-213ENST00000485080 SMG9Q9H0W8 520 aaKnown RBP18.72■□□□□ 0.59
SREBF1-213ENST00000485080 RTN4Q9NQC3 1192 aaKnown RBP18.72■□□□□ 0.59
SREBF1-213ENST00000485080 ARHGEF3Q9NR81 526 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 PCDHGC3Q9UN70 934 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 FHOD1Q9Y613 1164 aa18.72■□□□□ 0.59
SREBF1-213ENST00000485080 FAM86C2PA6NEL3 165 aa18.71■□□□□ 0.59
SREBF1-213ENST00000485080 M0QYV0 167 aa18.71■□□□□ 0.59
SREBF1-213ENST00000485080 CYP26A1O43174 497 aa18.71■□□□□ 0.59
SREBF1-213ENST00000485080 COCHO43405 550 aa18.71■□□□□ 0.59
SREBF1-213ENST00000485080 TLR5O60602 858 aa18.71■□□□□ 0.59
SREBF1-213ENST00000485080 CLCN1P35523 988 aa18.71■□□□□ 0.59
SREBF1-213ENST00000485080 PGFP49763 221 aa18.71■□□□□ 0.59
SREBF1-213ENST00000485080 TKTL1P51854 596 aa18.71■□□□□ 0.59
SREBF1-213ENST00000485080 STARD6P59095 220 aa18.71■□□□□ 0.59
SREBF1-213ENST00000485080 UBXN1Q04323 297 aa18.71■□□□□ 0.59
SREBF1-213ENST00000485080 SYCP1Q15431 976 aa18.71■□□□□ 0.59
SREBF1-213ENST00000485080 SLC44A4Q53GD3 710 aa18.71■□□□□ 0.59
SREBF1-213ENST00000485080 PMF1Q6P1K2 205 aa18.71■□□□□ 0.59
SREBF1-213ENST00000485080 SCD5Q86SK9 330 aa18.71■□□□□ 0.59
SREBF1-213ENST00000485080 DDX42Q86XP3 938 aaKnown RBP eCLIP18.71■□□□□ 0.59
SREBF1-213ENST00000485080 RIN3Q8TB24 985 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms