RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 EFHD1Q9BUP0 239 aa5.06□□□□□ -1.6
SMC4-215ENST00000484799 NKX1-2Q9UD57 310 aaPredicted RBP5.06□□□□□ -1.6
SMC4-215ENST00000484799 OGDHLQ9ULD0 1010 aa5.06□□□□□ -1.6
SMC4-215ENST00000484799 TMEM233B4DJY2 109 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 TUSC2O75896 110 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 MT-CO3P00414 261 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 A1BGP04217 495 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 EN2P19622 333 aaPredicted RBP5.05□□□□□ -1.6
SMC4-215ENST00000484799 SCP2P22307 547 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 CACNB3P54284 484 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 SLC29A2Q14542 456 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 DCAF12L1Q5VU92 463 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 ANO7Q6IWH7 933 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 VSTM1Q6UX27 236 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 ZNF813Q6ZN06 617 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 Q8N9P0 234 aaPredicted RBP5.05□□□□□ -1.6
SMC4-215ENST00000484799 VPS50Q96JG6 964 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 THAP7Q9BT49 309 aaPredicted RBP5.05□□□□□ -1.6
SMC4-215ENST00000484799 B3GNT5Q9BYG0 378 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 SPRTNQ9H040 489 aaPredicted RBP5.05□□□□□ -1.6
SMC4-215ENST00000484799 ZCWPW1Q9H0M4 648 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 METTL14Q9HCE5 456 aaKnown RBP5.05□□□□□ -1.6
SMC4-215ENST00000484799 XPNPEP3Q9NQH7 507 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 TCEAL9Q9UHQ7 104 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 CDY1Q9Y6F8 540 aa5.05□□□□□ -1.6
SMC4-215ENST00000484799 PYCARD-AS1I3L0S3 204 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 M0R3H8 397 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 ADAMTS3O15072 1205 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 TMPRSS11DO60235 418 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 INMTO95050 263 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 MAP4K4O95819 1239 aaPredicted RBP5.04□□□□□ -1.6
SMC4-215ENST00000484799 FGBP02675 491 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 TMEM191BP0C7N4 346 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 SNHG28P0DPA3 235 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 TPH1P17752 444 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 GATMP50440 423 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 AGFG1P52594 562 aaKnown RBP5.04□□□□□ -1.6
SMC4-215ENST00000484799 STK3Q13188 491 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 LAMB3Q13751 1172 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 ARHGEF7Q14155 803 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 LRRC41Q15345 812 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 CYP1B1Q16678 543 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 ZNF260Q3ZCT1 412 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 ODR4Q5SWX8 454 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 CXorf57Q6NSI4 855 aaKnown RBP5.04□□□□□ -1.6
SMC4-215ENST00000484799 SHC4Q6S5L8 630 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 YAF2Q8IY57 180 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 IL31RAQ8NI17 732 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 OSR1Q8TAX0 266 aaPredicted RBP5.04□□□□□ -1.6
SMC4-215ENST00000484799 CDH19Q9H159 772 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 C1orf112Q9NSG2 853 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 ITGB1BP2Q9UKP3 347 aa5.04□□□□□ -1.6
SMC4-215ENST00000484799 SCAF8Q9UPN6 1271 aaKnown RBP5.04□□□□□ -1.6
SMC4-215ENST00000484799 ISM1B1AKI9 464 aa5.03□□□□□ -1.6
SMC4-215ENST00000484799 FAM227AF5H4B4 570 aa5.03□□□□□ -1.6
SMC4-215ENST00000484799 RAB27BO00194 218 aa5.03□□□□□ -1.6
SMC4-215ENST00000484799 SOCS2O14508 198 aa5.03□□□□□ -1.6
SMC4-215ENST00000484799 CCP110O43303 1012 aa5.03□□□□□ -1.6
SMC4-215ENST00000484799 MGEA5O60502 916 aa5.03□□□□□ -1.6
SMC4-215ENST00000484799 PIAS2O75928 621 aa5.03□□□□□ -1.6
SMC4-215ENST00000484799 TOP3BO95985 862 aaKnown RBP5.03□□□□□ -1.6
SMC4-215ENST00000484799 ATP5F1P24539 256 aaPredicted RBP5.03□□□□□ -1.6
SMC4-215ENST00000484799 UQCRC1P31930 480 aa5.03□□□□□ -1.6
SMC4-215ENST00000484799 PTDSS1P48651 473 aaKnown RBP5.03□□□□□ -1.6
SMC4-215ENST00000484799 PGDP52209 483 aa5.03□□□□□ -1.6
SMC4-215ENST00000484799 MAPK7Q13164 816 aa5.03□□□□□ -1.6
SMC4-215ENST00000484799 FHL1Q13642 323 aa5.03□□□□□ -1.6
SMC4-215ENST00000484799 CNN3Q15417 329 aaKnown RBP5.03□□□□□ -1.6
SMC4-215ENST00000484799 RNASE12Q5GAN4 147 aaKnown RBP5.03□□□□□ -1.6
SMC4-215ENST00000484799 EPM2AIP1Q7L775 607 aaPredicted RBP5.03□□□□□ -1.6
SMC4-215ENST00000484799 BCDIN3DQ7Z5W3 292 aaKnown RBP5.03□□□□□ -1.6
SMC4-215ENST00000484799 ZBTB45Q96K62 511 aaPredicted RBP5.03□□□□□ -1.6
SMC4-215ENST00000484799 VN1R3Q9BXE9 311 aa5.03□□□□□ -1.6
SMC4-215ENST00000484799 RTFDC1Q9BY42 306 aaPredicted RBP5.03□□□□□ -1.6
SMC4-215ENST00000484799 TRIM5Q9C035 493 aa5.03□□□□□ -1.6
SMC4-215ENST00000484799 ZNF287Q9HBT7 754 aa5.03□□□□□ -1.6
SMC4-215ENST00000484799 CPNE7Q9UBL6 633 aa5.03□□□□□ -1.6
SMC4-215ENST00000484799 AFF4Q9UHB7 1163 aaKnown RBP5.03□□□□□ -1.6
SMC4-215ENST00000484799 USP19O94966 1318 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 MBD3L4A6NDZ8 208 aaPredicted RBP5.02□□□□□ -1.61
SMC4-215ENST00000484799 MBD3L3A6NE82 208 aaPredicted RBP5.02□□□□□ -1.61
SMC4-215ENST00000484799 H7C4K7 107 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 EXOC5O00471 708 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 BCAR3O75815 825 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 KLRC1P26715 233 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 NR4A2P43354 598 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 ZNF91Q05481 1191 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 LMAN2Q12907 356 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 CNGA2Q16280 664 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 PFKFB3Q16875 520 aaPredicted RBP5.02□□□□□ -1.61
SMC4-215ENST00000484799 Q4G0T1 1027 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 B3GNT9Q6UX72 402 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 ZDHHC24Q6UX98 284 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 RANBP10Q6VN20 620 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 DCDC5Q6ZRR9 648 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 CCDC149Q6ZUS6 474 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 FAM71DQ8N9W8 422 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 PIGOQ8TEQ8 1089 aa5.02□□□□□ -1.61
SMC4-215ENST00000484799 ZNF48Q96MX3 618 aaPredicted RBP5.02□□□□□ -1.61
SMC4-215ENST00000484799 DPH1Q9BZG8 443 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms