RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 NT5C1BQ96P26 610 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 MED15Q96RN5 788 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 NUP62CLQ9H1M0 184 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 LINC00597Q9H2U6 94 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 LMBRD1Q9NUN5 540 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 IL37Q9NZH6 218 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 CFAP97Q9P2B7 532 aa12.98□□□□□ -0.33
MSH5-216ENST00000484309 COCHO43405 550 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 OLFM2O95897 454 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 CALCAP01258 141 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 SP9P0CG40 484 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 IRF1P10914 325 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 CD19P15391 556 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 NBL1P41271 181 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 MAGEA9P43362 315 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 RPS9P46781 194 aaKnown RBP12.97□□□□□ -0.33
MSH5-216ENST00000484309 MLLT6P55198 1093 aaPredicted RBP12.97□□□□□ -0.33
MSH5-216ENST00000484309 SLC7A9P82251 487 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 CSTF1Q05048 431 aaKnown RBP12.97□□□□□ -0.33
MSH5-216ENST00000484309 KCNH2Q12809 1159 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 GAS6Q14393 721 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 GOLGA7BQ2TAP0 167 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 EML3Q32P44 896 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 HECTD3Q5T447 861 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 FOXR2Q6PJQ5 311 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 ARHGEF19Q8IW93 802 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 PPM1KQ8N3J5 372 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 CPA6Q8N4T0 437 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 TTC39CQ8N584 583 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 UBR7Q8N806 425 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 OVCA2Q8WZ82 227 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 MSANTD3Q96H12 275 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 CNOT6LQ96LI5 555 aaKnown RBP12.97□□□□□ -0.33
MSH5-216ENST00000484309 DUSP16Q9BY84 665 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 DNAI2Q9GZS0 605 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 CHRDQ9H2X0 955 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 ECT2Q9H8V3 914 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 RWDD2AQ9UIY3 292 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 NUDT5Q9UKK9 219 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.97□□□□□ -0.33
MSH5-216ENST00000484309 EML5Q05BV3 1969 aa12.97□□□□□ -0.33
MSH5-216ENST00000484309 FAM92AA1XBS5 289 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 GNA14O95837 355 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 AFPP02771 609 aaKnown RBP12.96□□□□□ -0.33
MSH5-216ENST00000484309 ZDHHC11BP0C7U3 371 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 CCDC192P0DO97 292 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 TCF3P15923 654 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 PFKLP17858 780 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 TBXAS1P24557 533 aaPredicted RBP12.96□□□□□ -0.33
MSH5-216ENST00000484309 GJA4P35212 333 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 YWHAEP62258 255 aaKnown RBP12.96□□□□□ -0.33
MSH5-216ENST00000484309 LRRC32Q14392 662 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 DPCR1Q3MIW9 517 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 FSTL4Q6MZW2 842 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 TMEM270Q6UE05 265 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 RRAGAQ7L523 313 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 TTC30AQ86WT1 665 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 LMO3Q8TAP4 145 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 ATP2A3Q93084 1043 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 WBP2Q969T9 261 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 FAXDC2Q96IV6 333 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 NACA2Q9H009 215 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 FBXO44Q9H4M3 255 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 NMUR1Q9HB89 426 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 TLR8Q9NR97 1041 aaKnown RBP12.96□□□□□ -0.33
MSH5-216ENST00000484309 COMMD8Q9NX08 183 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 OSER1Q9NX31 292 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 TSPAN16Q9UKR8 245 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 PCDHB4Q9Y5E5 795 aa12.96□□□□□ -0.33
MSH5-216ENST00000484309 MYO18AQ92614 2054 aaKnown RBP12.96□□□□□ -0.33
MSH5-216ENST00000484309 A0A1W2PQH9 124 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 TULP2O00295 520 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 MDM4O15151 490 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 TLR5O60602 858 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 GFRA3O60609 400 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 FGFR1OPO95684 399 aaKnown RBP12.95□□□□□ -0.34
MSH5-216ENST00000484309 TBX18O95935 607 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 EGFP01133 1207 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 HOXC13P31276 330 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 KIF11P52732 1056 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 MARSP56192 900 aaKnown RBP12.95□□□□□ -0.34
MSH5-216ENST00000484309 SATB1Q01826 763 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 CETN1Q12798 172 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 TPD52L1Q16890 204 aaPredicted RBP12.95□□□□□ -0.34
MSH5-216ENST00000484309 SGO2Q562F6 1265 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 HSP90AA4PQ58FG1 418 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 ARHGAP17Q68EM7 881 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 PKN3Q6P5Z2 889 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 C1orf228Q6PIY5 440 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 CLEC17AQ6ZS10 378 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 ASCL5Q7RTU5 278 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 EHBP1Q8NDI1 1231 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 ZFRQ96KR1 1074 aaKnown RBP12.95□□□□□ -0.34
MSH5-216ENST00000484309 CRACR2AQ9BSW2 395 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 INTS2Q9H0H0 1204 aaKnown RBP12.95□□□□□ -0.34
MSH5-216ENST00000484309 FBRSL1Q9HCM7 1045 aaKnown RBP12.95□□□□□ -0.34
MSH5-216ENST00000484309 C2orf42Q9NWW7 574 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 SCML2Q9UQR0 700 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 FAM186AA6NE01 2351 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 RIF1Q5UIP0 2472 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms