RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 PAPSS2O95340 614 aaPredicted RBP22.8■■□□□ 1.24
SYPL1-206ENST00000483448 FAM200BP0CF97 657 aa22.8■■□□□ 1.24
SYPL1-206ENST00000483448 TCERG1LQ5VWI1 586 aa22.8■■□□□ 1.24
SYPL1-206ENST00000483448 FILIP1Q7Z7B0 1213 aa22.8■■□□□ 1.24
SYPL1-206ENST00000483448 LONP2Q86WA8 852 aa22.8■■□□□ 1.24
SYPL1-206ENST00000483448 DDX42Q86XP3 938 aaKnown RBP eCLIP22.8■■□□□ 1.24
SYPL1-206ENST00000483448 JAKMIP2Q96AA8 810 aa22.8■■□□□ 1.24
SYPL1-206ENST00000483448 CYFIP2Q96F07 1278 aa22.8■■□□□ 1.24
SYPL1-206ENST00000483448 NACA2Q9H009 215 aa22.8■■□□□ 1.24
SYPL1-206ENST00000483448 GMIPQ9P107 970 aa22.8■■□□□ 1.24
SYPL1-206ENST00000483448 SCAMP3O14828 347 aaKnown RBP22.79■■□□□ 1.24
SYPL1-206ENST00000483448 RNF40O75150 1001 aa22.79■■□□□ 1.24
SYPL1-206ENST00000483448 BEST1O76090 585 aa22.79■■□□□ 1.24
SYPL1-206ENST00000483448 ID4P47928 161 aa22.79■■□□□ 1.24
SYPL1-206ENST00000483448 MXI1P50539 228 aa22.79■■□□□ 1.24
SYPL1-206ENST00000483448 SIM2Q14190 667 aaPredicted RBP22.79■■□□□ 1.24
SYPL1-206ENST00000483448 ANKRD40Q6AI12 368 aa22.79■■□□□ 1.24
SYPL1-206ENST00000483448 ISM2Q6H9L7 571 aa22.79■■□□□ 1.24
SYPL1-206ENST00000483448 PKN3Q6P5Z2 889 aa22.79■■□□□ 1.24
SYPL1-206ENST00000483448 TWNKQ96RR1 684 aa22.79■■□□□ 1.24
SYPL1-206ENST00000483448 GTPBP4Q9BZE4 634 aaKnown RBP22.79■■□□□ 1.24
SYPL1-206ENST00000483448 FBXO44Q9H4M3 255 aa22.79■■□□□ 1.24
SYPL1-206ENST00000483448 GMEB2Q9UKD1 530 aa22.79■■□□□ 1.24
SYPL1-206ENST00000483448 COCHO43405 550 aa22.78■■□□□ 1.24
SYPL1-206ENST00000483448 OLFM2O95897 454 aa22.78■■□□□ 1.24
SYPL1-206ENST00000483448 INCA1Q0VD86 236 aa22.78■■□□□ 1.24
SYPL1-206ENST00000483448 STIM1Q13586 685 aa22.78■■□□□ 1.24
SYPL1-206ENST00000483448 FBXO43Q4G163 708 aa22.78■■□□□ 1.24
SYPL1-206ENST00000483448 DCAF17Q5H9S7 520 aaPredicted RBP22.78■■□□□ 1.24
SYPL1-206ENST00000483448 FBXL13Q8NEE6 735 aa22.78■■□□□ 1.24
SYPL1-206ENST00000483448 ZMIZ2Q8NF64 920 aa22.78■■□□□ 1.24
SYPL1-206ENST00000483448 TIGD1Q96MW7 591 aa22.78■■□□□ 1.24
SYPL1-206ENST00000483448 HNRNPABQ99729 332 aaKnown RBP22.78■■□□□ 1.24
SYPL1-206ENST00000483448 CSNK1G1Q9HCP0 422 aa22.78■■□□□ 1.24
SYPL1-206ENST00000483448 RAB20Q9NX57 234 aa22.78■■□□□ 1.24
SYPL1-206ENST00000483448 IL37Q9NZH6 218 aa22.78■■□□□ 1.24
SYPL1-206ENST00000483448 GVINP1Q7Z2Y8 2422 aa22.78■■□□□ 1.24
SYPL1-206ENST00000483448 HRO43593 1189 aa22.77■■□□□ 1.24
SYPL1-206ENST00000483448 FKBP3Q00688 224 aaKnown RBP22.77■■□□□ 1.24
SYPL1-206ENST00000483448 SRSF5Q13243 272 aaKnown RBP22.77■■□□□ 1.24
SYPL1-206ENST00000483448 ZNF394Q53GI3 561 aa22.77■■□□□ 1.24
SYPL1-206ENST00000483448 CEP68Q76N32 757 aa22.77■■□□□ 1.24
SYPL1-206ENST00000483448 ADGRG2Q8IZP9 1017 aa22.77■■□□□ 1.24
SYPL1-206ENST00000483448 SEMA4DQ92854 862 aa22.77■■□□□ 1.24
SYPL1-206ENST00000483448 HEXIM2Q96MH2 286 aaKnown RBP22.77■■□□□ 1.24
SYPL1-206ENST00000483448 CCSER2Q9H7U1 834 aa22.77■■□□□ 1.24
SYPL1-206ENST00000483448 TLR8Q9NR97 1041 aaKnown RBP22.77■■□□□ 1.24
SYPL1-206ENST00000483448 SH3BP1Q9Y3L3 701 aa22.77■■□□□ 1.24
SYPL1-206ENST00000483448 CILPO75339 1184 aa22.76■■□□□ 1.23
SYPL1-206ENST00000483448 HOXC13P31276 330 aa22.76■■□□□ 1.23
SYPL1-206ENST00000483448 CNR2P34972 360 aa22.76■■□□□ 1.23
SYPL1-206ENST00000483448 PXNP49023 591 aaPredicted RBP22.76■■□□□ 1.23
SYPL1-206ENST00000483448 COBLL1Q53SF7 1204 aa22.76■■□□□ 1.23
SYPL1-206ENST00000483448 SNX30Q5VWJ9 437 aa22.76■■□□□ 1.23
SYPL1-206ENST00000483448 GPR161Q8N6U8 529 aaKnown RBP22.76■■□□□ 1.23
SYPL1-206ENST00000483448 KIAA1958Q8N8K9 716 aa22.76■■□□□ 1.23
SYPL1-206ENST00000483448 RPLP0P6Q8NHW5 317 aa22.76■■□□□ 1.23
SYPL1-206ENST00000483448 TBC1D14Q9P2M4 693 aa22.76■■□□□ 1.23
SYPL1-206ENST00000483448 SLC16A3O15427 465 aaKnown RBP22.75■■□□□ 1.23
SYPL1-206ENST00000483448 CYP17A1P05093 508 aa22.75■■□□□ 1.23
SYPL1-206ENST00000483448 ACO1P21399 889 aaKnown RBP22.75■■□□□ 1.23
SYPL1-206ENST00000483448 HOXA6P31267 233 aa22.75■■□□□ 1.23
SYPL1-206ENST00000483448 DHCR24Q15392 516 aa22.75■■□□□ 1.23
SYPL1-206ENST00000483448 WDR5BQ86VZ2 330 aa22.75■■□□□ 1.23
SYPL1-206ENST00000483448 SPATA20Q8TB22 786 aa22.75■■□□□ 1.23
SYPL1-206ENST00000483448 WHAMMQ8TF30 809 aa22.75■■□□□ 1.23
SYPL1-206ENST00000483448 POLR3BQ9NW08 1133 aaPredicted RBP22.75■■□□□ 1.23
SYPL1-206ENST00000483448 ZNF292O60281 2723 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 E2F8A0AVK6 867 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 FAM92AA1XBS5 289 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 TRIM49BA6NDI0 452 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 PSMA7O14818 248 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 IRF1P10914 325 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 TUBP50607 506 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 PMS1P54277 932 aaKnown RBP22.74■■□□□ 1.23
SYPL1-206ENST00000483448 SEC13P55735 322 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 LRRC63Q05C16 580 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 LAIR1Q6GTX8 287 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 CLEC20AQ6ZU45 233 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 TTC39CQ8N584 583 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 CCDC26Q8TAB7 109 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 TATDN2Q93075 761 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 CISHQ9NSE2 258 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 ARMCX3Q9UH62 379 aaPredicted RBP22.74■■□□□ 1.23
SYPL1-206ENST00000483448 USP18Q9UMW8 372 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 GPR179Q6PRD1 2367 aa22.74■■□□□ 1.23
SYPL1-206ENST00000483448 OTOGLQ3ZCN5 2332 aa22.73■■□□□ 1.23
SYPL1-206ENST00000483448 TLR5O60602 858 aa22.73■■□□□ 1.23
SYPL1-206ENST00000483448 ADH1CP00326 375 aa22.73■■□□□ 1.23
SYPL1-206ENST00000483448 ZDHHC11BP0C7U3 371 aa22.73■■□□□ 1.23
SYPL1-206ENST00000483448 OPRD1P41143 372 aa22.73■■□□□ 1.23
SYPL1-206ENST00000483448 MCCD1P59942 119 aaPredicted RBP22.73■■□□□ 1.23
SYPL1-206ENST00000483448 CBWD6Q4V339 395 aa22.73■■□□□ 1.23
SYPL1-206ENST00000483448 CBWD3Q5JTY5 395 aa22.73■■□□□ 1.23
SYPL1-206ENST00000483448 CBWD5Q5RIA9 395 aa22.73■■□□□ 1.23
SYPL1-206ENST00000483448 PPP1R26Q5T8A7 1209 aaPredicted RBP22.73■■□□□ 1.23
SYPL1-206ENST00000483448 RHBDF2Q6PJF5 856 aa22.73■■□□□ 1.23
SYPL1-206ENST00000483448 GPRIN1Q7Z2K8 1008 aa22.73■■□□□ 1.23
SYPL1-206ENST00000483448 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.73■■□□□ 1.23
SYPL1-206ENST00000483448 TMEM176AQ96HP8 235 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms