RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 TDP1Q9NUW8 608 aa17.16■□□□□ 0.34
COL2A1-206ENST00000483376 AJAP1Q9UKB5 411 aaPredicted RBP17.16■□□□□ 0.34
COL2A1-206ENST00000483376 ARHGAP26Q9UNA1 814 aa17.16■□□□□ 0.34
COL2A1-206ENST00000483376 FHOD1Q9Y613 1164 aa17.16■□□□□ 0.34
COL2A1-206ENST00000483376 ANAPC1Q9H1A4 1944 aa17.15■□□□□ 0.34
COL2A1-206ENST00000483376 HEPACAM2A8MVW5 462 aa17.15■□□□□ 0.34
COL2A1-206ENST00000483376 BRD2P25440 801 aaKnown RBP17.15■□□□□ 0.34
COL2A1-206ENST00000483376 GNA15P30679 374 aa17.15■□□□□ 0.34
COL2A1-206ENST00000483376 VIPR2P41587 438 aa17.15■□□□□ 0.34
COL2A1-206ENST00000483376 MLLT6P55198 1093 aaPredicted RBP17.15■□□□□ 0.34
COL2A1-206ENST00000483376 KLHDC10Q6PID8 442 aa17.15■□□□□ 0.34
COL2A1-206ENST00000483376 ZNF606Q8WXB4 792 aa17.15■□□□□ 0.34
COL2A1-206ENST00000483376 USP13Q92995 863 aaPredicted RBP17.15■□□□□ 0.34
COL2A1-206ENST00000483376 RSPRY1Q96DX4 576 aa17.15■□□□□ 0.34
COL2A1-206ENST00000483376 TRMT61BQ9BVS5 477 aaKnown RBP17.15■□□□□ 0.34
COL2A1-206ENST00000483376 PLA2G2FQ9BZM2 168 aa17.15■□□□□ 0.34
COL2A1-206ENST00000483376 CYLDQ9NQC7 956 aa17.15■□□□□ 0.34
COL2A1-206ENST00000483376 TLR8Q9NR97 1041 aaKnown RBP17.15■□□□□ 0.34
COL2A1-206ENST00000483376 CLIC5Q9NZA1 410 aa17.15■□□□□ 0.34
COL2A1-206ENST00000483376 PCDHGC3Q9UN70 934 aa17.15■□□□□ 0.34
COL2A1-206ENST00000483376 A0A1B0GTH6 734 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 A0A1W2PQC6 194 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 C2orf78A6NCI8 922 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 F8VZ95 297 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 ARNTLO00327 626 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 FOXN3O00409 490 aaPredicted RBP17.14■□□□□ 0.33
COL2A1-206ENST00000483376 DPYSL4O14531 572 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 CHADO15335 359 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 NARSO43776 548 aaKnown RBP17.14■□□□□ 0.33
COL2A1-206ENST00000483376 HDCP19113 662 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 GPD2P43304 727 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 PLCB2Q00722 1185 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 UBXN1Q04323 297 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 PTK2Q05397 1052 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 USP4Q13107 963 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 DRAP1Q14919 205 aaPredicted RBP17.14■□□□□ 0.33
COL2A1-206ENST00000483376 SYCP1Q15431 976 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 HECTD3Q5T447 861 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 LRSAM1Q6UWE0 723 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 ARHGAP18Q8N392 663 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 BPIFB1Q8TDL5 484 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 IRF7Q92985 503 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 C11orf16Q9NQ32 467 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 CNGB3Q9NQW8 809 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 GMIPQ9P107 970 aa17.14■□□□□ 0.33
COL2A1-206ENST00000483376 TMEM221A6NGB7 291 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 PRR33A8MZF0 331 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 M0QYV0 167 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 M0R296 226 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 CKMP06732 381 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 CLCN1P35523 988 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 JAM2P57087 298 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 GPC5P78333 572 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 ZNF77Q15935 545 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 FILIP1LQ4L180 1135 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 ARHGAP29Q52LW3 1261 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 LUZP1Q86V48 1076 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 LRRC3BQ96PB8 259 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 SLC22A12Q96S37 553 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 CDK5RAP1Q96SZ6 601 aaKnown RBP17.13■□□□□ 0.33
COL2A1-206ENST00000483376 LHX5Q9H2C1 402 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 SMOC2Q9H3U7 446 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 TRPC7Q9HCX4 862 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 MYH10P35580 1976 aa17.13■□□□□ 0.33
COL2A1-206ENST00000483376 KIF26AQ9ULI4 1882 aaPredicted RBP17.12■□□□□ 0.33
COL2A1-206ENST00000483376 TULP2O00295 520 aa17.12■□□□□ 0.33
COL2A1-206ENST00000483376 CYP26A1O43174 497 aa17.12■□□□□ 0.33
COL2A1-206ENST00000483376 THAP12O43422 761 aa17.12■□□□□ 0.33
COL2A1-206ENST00000483376 ZBED1O96006 694 aa17.12■□□□□ 0.33
COL2A1-206ENST00000483376 TKTL1P51854 596 aa17.12■□□□□ 0.33
COL2A1-206ENST00000483376 ZNF445P59923 1031 aa17.12■□□□□ 0.33
COL2A1-206ENST00000483376 IFRD2Q12894 506 aaPredicted RBP17.12■□□□□ 0.33
COL2A1-206ENST00000483376 RAPGEF1Q13905 1077 aa17.12■□□□□ 0.33
COL2A1-206ENST00000483376 PMF1Q6P1K2 205 aa17.12■□□□□ 0.33
COL2A1-206ENST00000483376 TADA2BQ86TJ2 420 aa17.12■□□□□ 0.33
COL2A1-206ENST00000483376 DDX42Q86XP3 938 aaKnown RBP eCLIP17.12■□□□□ 0.33
COL2A1-206ENST00000483376 ARL14EPQ8N8R7 260 aaPredicted RBP17.12■□□□□ 0.33
COL2A1-206ENST00000483376 NEK11Q8NG66 645 aa17.12■□□□□ 0.33
COL2A1-206ENST00000483376 UBA3Q8TBC4 463 aa17.12■□□□□ 0.33
COL2A1-206ENST00000483376 IRGQQ8WZA9 623 aa17.12■□□□□ 0.33
COL2A1-206ENST00000483376 SECISBP2LQ93073 1101 aaKnown RBP17.12■□□□□ 0.33
COL2A1-206ENST00000483376 MSANTD3Q96H12 275 aa17.12■□□□□ 0.33
COL2A1-206ENST00000483376 RNF38Q9H0F5 515 aa17.12■□□□□ 0.33
COL2A1-206ENST00000483376 LRRC4Q9HBW1 653 aa17.12■□□□□ 0.33
COL2A1-206ENST00000483376 FAM207AQ9NSI2 230 aaPredicted RBP17.12■□□□□ 0.33
COL2A1-206ENST00000483376 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.12■□□□□ 0.33
COL2A1-206ENST00000483376 THG1LQ9NWX6 298 aaKnown RBP17.12■□□□□ 0.33
COL2A1-206ENST00000483376 CHORDC1Q9UHD1 332 aaPredicted RBP17.12■□□□□ 0.33
COL2A1-206ENST00000483376 CCL26Q9Y258 94 aa17.12■□□□□ 0.33
COL2A1-206ENST00000483376 GOLGA6L19H0YKK7 550 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 ZNF263O14978 683 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 EPHB6O15197 1021 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 COCHO43405 550 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 TLR5O60602 858 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 FBXO21O94952 628 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 GLULP15104 373 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 USP8P40818 1118 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 ACADSBP45954 432 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 KLK7P49862 253 aa17.11■□□□□ 0.33
COL2A1-206ENST00000483376 PRKCQQ04759 706 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms