RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 WTAPQ15007 396 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 RTN1Q16799 776 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 ANKRD26P1Q6NSI1 321 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 GPR141Q7Z602 305 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 LILRB2Q8N423 598 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 MARCH10Q8NA82 808 aaPredicted RBP8.13□□□□□ -1.11
COL4A5-205ENST00000483338 TTC13Q8NBP0 860 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 TNFRSF25Q93038 417 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 ZUFSPQ96AP4 578 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 MAP6Q96JE9 813 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 RPF2Q9H7B2 306 aaKnown RBP8.13□□□□□ -1.11
COL4A5-205ENST00000483338 ANLNQ9NQW6 1124 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 CNNM1Q9NRU3 951 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 A0A0A6YYK5 440 aaPredicted RBP8.13□□□□□ -1.11
COL4A5-205ENST00000483338 B8ZZF3 427 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 H3BMQ9 156 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 MSI1O43347 362 aaKnown RBP8.13□□□□□ -1.11
COL4A5-205ENST00000483338 PRDM1O75626 825 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 PLEKHA8P1O95397 391 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 MYL2P10916 166 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 NELFEP18615 380 aaKnown RBP8.13□□□□□ -1.11
COL4A5-205ENST00000483338 MLLT3P42568 568 aaPredicted RBP8.13□□□□□ -1.11
COL4A5-205ENST00000483338 MAGEA4P43358 317 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 SLC15A2Q16348 729 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 PPP6R3Q5H9R7 873 aaPredicted RBP8.13□□□□□ -1.11
COL4A5-205ENST00000483338 PIK3AP1Q6ZUJ8 805 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 LYSMD3Q7Z3D4 306 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 CCDC105Q8IYK2 499 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 GLIS3Q8NEA6 775 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 RASGRP4Q8TDF6 673 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 GIMAP5Q96F15 307 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 COG8Q96MW5 612 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 CLPBQ9H078 707 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 CAAP1Q9H8G2 361 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 PLEKHA5Q9HAU0 1116 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 NEK6Q9HC98 313 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 MOV10Q9HCE1 1003 aaKnown RBP8.13□□□□□ -1.11
COL4A5-205ENST00000483338 BABAM1Q9NWV8 329 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 TAGLN3Q9UI15 199 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 NENFQ9UMX5 172 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 SMG5Q9UPR3 1016 aaKnown RBP8.13□□□□□ -1.11
COL4A5-205ENST00000483338 CFL2Q9Y281 166 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 RNF11Q9Y3C5 154 aa8.13□□□□□ -1.11
COL4A5-205ENST00000483338 hCG_1642624A0A1W2PR95 340 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 TCRBV7S2A1N4TA0A589 114 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 ZNF701M0R085 212 aaPredicted RBP8.12□□□□□ -1.11
COL4A5-205ENST00000483338 KCNQ2O43526 872 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 CCNT2O60583 730 aaKnown RBP8.12□□□□□ -1.11
COL4A5-205ENST00000483338 JRKO75564 520 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 STAT3P40763 770 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 HADHAP40939 763 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 NPEPPSP55786 919 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 PTK2BQ14289 1009 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 KLHL38Q2WGJ6 581 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 ZNF790Q6PG37 636 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 OTOP3Q7RTS5 596 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 BTLAQ7Z6A9 289 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 DSG4Q86SJ6 1040 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 TNIP2Q8NFZ5 429 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 SLC16A10Q8TF71 515 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 CCDC124Q96CT7 223 aaKnown RBP8.12□□□□□ -1.11
COL4A5-205ENST00000483338 CD209Q9NNX6 404 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 SEPT10Q9P0V9 454 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 ATPIF1Q9UII2 106 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 IKBKGQ9Y6K9 419 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 FAM25EA8MYX2 175 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 TAF4O00268 1085 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 PEX14O75381 377 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 ZNF254O75437 659 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 H2AFZP0C0S5 128 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 GRM5P41594 1212 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 CDH15P55291 814 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 SLC25A3Q00325 362 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 PGS1Q32NB8 556 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 AARS2Q5JTZ9 985 aaKnown RBP8.12□□□□□ -1.11
COL4A5-205ENST00000483338 ATAD3BQ5T9A4 648 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 SCARA3Q6AZY7 606 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 LRRC55Q6ZSA7 311 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 H2AFVQ71UI9 128 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 CLSTN3Q9BQT9 956 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 C12orf65Q9H3J6 166 aaKnown RBP8.12□□□□□ -1.11
COL4A5-205ENST00000483338 ALG13Q9NP73 1137 aaKnown RBP8.12□□□□□ -1.11
COL4A5-205ENST00000483338 POLMQ9NP87 494 aaPredicted RBP8.12□□□□□ -1.11
COL4A5-205ENST00000483338 UCKL1Q9NWZ5 548 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 KLQ9UEF7 1012 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 ST14Q9Y5Y6 855 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 GOLGA8QA0A0J9YX86 632 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 A0A1W2PPM1 405 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 GOLGA8OA6NCC3 632 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 GOLGA8NF8WBI6 632 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 GOLGA8RI6L899 631 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 DYNC1LI2O43237 492 aaPredicted RBP8.12□□□□□ -1.11
COL4A5-205ENST00000483338 ARHGEF15O94989 841 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 C8BP07358 591 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 CFL1P23528 166 aaKnown RBP8.12□□□□□ -1.11
COL4A5-205ENST00000483338 GRK2P25098 689 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 POLR2BP30876 1174 aaKnown RBP8.12□□□□□ -1.11
COL4A5-205ENST00000483338 COILP38432 576 aaPredicted RBP8.12□□□□□ -1.11
COL4A5-205ENST00000483338 EPHB1P54762 984 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms