RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 EDN1P05305 212 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 ITGAVP06756 1048 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 ZNF394Q53GI3 561 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 DCUN1D2Q6PH85 259 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 DPH6Q7L8W6 267 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 SCUBE1Q8IWY4 988 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 LPAR1Q92633 364 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 TARS2Q9BW92 718 aaKnown RBP12.93□□□□□ -0.34
CCDC78-213ENST00000482878 EBF3Q9H4W6 596 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 PCDH9Q9HC56 1237 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 PIM2Q9P1W9 311 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 C2CD2LO14523 706 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 ATP2A1O14983 1001 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 STK10O94804 968 aaKnown RBP12.93□□□□□ -0.34
CCDC78-213ENST00000482878 CST3P01034 146 aaPredicted RBP12.93□□□□□ -0.34
CCDC78-213ENST00000482878 ZNF132P52740 706 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 NCOA4Q13772 614 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 RASA2Q15283 850 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 CTC1Q2NKJ3 1217 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 SLC45A4Q5BKX6 768 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 DALRD3Q5D0E6 543 aaKnown RBP12.93□□□□□ -0.34
CCDC78-213ENST00000482878 LRRC38Q5VT99 294 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 DNAJC24Q6P3W2 148 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 TRIM67Q6ZTA4 783 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 RFWD2Q8NHY2 731 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 PPP2R3CQ969Q6 453 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 ZNRF3Q9ULT6 936 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 TRAFD1O14545 582 aaPredicted RBP12.93□□□□□ -0.34
CCDC78-213ENST00000482878 PLSCR1O15162 318 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 HNRNPCL1O60812 293 aaKnown RBP12.93□□□□□ -0.34
CCDC78-213ENST00000482878 PSAPP07602 524 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 ANPEPP15144 967 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 CCND2P30279 289 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 GJA8P48165 433 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 AP2B1P63010 937 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 MAP3K10Q02779 954 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 BTKQ06187 659 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 KBTBD12Q3ZCT8 623 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 FAM83AQ86UY5 434 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 RTKN2Q8IZC4 609 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 SLC35B2Q8TB61 432 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 CPT1BQ92523 772 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 NCSTNQ92542 709 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 GPRASP2Q96D09 838 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 FBXO40Q9UH90 709 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 FAF1Q9UNN5 650 aaPredicted RBP12.93□□□□□ -0.34
CCDC78-213ENST00000482878 GINS2Q9Y248 185 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.93□□□□□ -0.34
CCDC78-213ENST00000482878 CNTNAP2Q9UHC6 1331 aa12.93□□□□□ -0.34
CCDC78-213ENST00000482878 TBXAS1P24557 533 aaPredicted RBP12.92□□□□□ -0.34
CCDC78-213ENST00000482878 MLH1P40692 756 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 EMC2Q15006 297 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 CYP4A22Q5TCH4 519 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 C1orf146Q5VVC0 180 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 FKBP1CQ5VVH2 108 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 GRAMD4Q6IC98 578 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 RINLQ6ZS11 566 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 C3orf62Q6ZUJ4 267 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 TCP10LQ8TDR4 215 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 PYROXD1Q8WU10 500 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 MZB1Q8WU39 189 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 ATG4CQ96DT6 458 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 PAFAH2Q99487 392 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 CGRRF1Q99675 332 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 MSTO1Q9BUK6 570 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 JPH1Q9HDC5 661 aaPredicted RBP12.92□□□□□ -0.34
CCDC78-213ENST00000482878 MYOZ2Q9NPC6 264 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 SAR1AQ9NR31 198 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 FBXO6Q9NRD1 293 aaPredicted RBP12.92□□□□□ -0.34
CCDC78-213ENST00000482878 SLC17A7Q9P2U7 560 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 LRRIQ4A6NIV6 560 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 BOLA2-SMG1P6H3BVE0 249 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 ACTR2P61160 394 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 CDC16Q13042 620 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 SMTNL2Q2TAL5 461 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 RBM44Q6ZP01 1051 aaKnown RBP12.92□□□□□ -0.34
CCDC78-213ENST00000482878 RHPN2Q8IUC4 686 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 WDTC1Q8N5D0 677 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 RPAP3Q9H6T3 665 aaPredicted RBP12.92□□□□□ -0.34
CCDC78-213ENST00000482878 RNF146Q9NTX7 359 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 BTBD7Q9P203 1132 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 CIDEBQ9UHD4 219 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 TCRBV7S3A2A0A539 114 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 C3orf70A6NLC5 250 aaPredicted RBP12.92□□□□□ -0.34
CCDC78-213ENST00000482878 H3BRJ5 948 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 PTPN7P35236 360 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 OTUD4Q01804 1114 aaKnown RBP12.92□□□□□ -0.34
CCDC78-213ENST00000482878 TMEM259Q4ZIN3 620 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 KCNT1Q5JUK3 1230 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 ADGRD1Q6QNK2 874 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 ABHD15Q6UXT9 468 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 ACTL9Q8TC94 416 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 ARMCX1Q9P291 453 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 SNCAIPQ9Y6H5 919 aa12.92□□□□□ -0.34
CCDC78-213ENST00000482878 SPDYE16A6NNV3 312 aaPredicted RBP12.91□□□□□ -0.34
CCDC78-213ENST00000482878 B2RBV5 119 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 H0YCG3 227 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 K7ERI5 159 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 CALB1P05937 261 aa12.91□□□□□ -0.34
CCDC78-213ENST00000482878 ARFIP2P53365 341 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms