RNA–Protein interactions for RNA: ENST00000482424.1

CLIP2-205, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 5

Gene CLIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-205ENST00000482424 NDRG2Q9UN36 371 aaKnown RBP21.19■□□□□ 0.98
CLIP2-205ENST00000482424 OTOL1A6NHN0 477 aaPredicted RBP21.18■□□□□ 0.98
CLIP2-205ENST00000482424 LEFTY2O00292 366 aa21.18■□□□□ 0.98
CLIP2-205ENST00000482424 ABL1P00519 1130 aa21.18■□□□□ 0.98
CLIP2-205ENST00000482424 CHRNB1P11230 501 aa21.18■□□□□ 0.98
CLIP2-205ENST00000482424 GPRIN1Q7Z2K8 1008 aa21.18■□□□□ 0.98
CLIP2-205ENST00000482424 MAML2Q8IZL2 1156 aaPredicted RBP21.18■□□□□ 0.98
CLIP2-205ENST00000482424 TTC8Q8TAM2 541 aa21.18■□□□□ 0.98
CLIP2-205ENST00000482424 ATOH1Q92858 354 aaPredicted RBP21.18■□□□□ 0.98
CLIP2-205ENST00000482424 EBF3Q9H4W6 596 aa21.18■□□□□ 0.98
CLIP2-205ENST00000482424 GMIPQ9P107 970 aa21.18■□□□□ 0.98
CLIP2-205ENST00000482424 SCML2Q9UQR0 700 aa21.18■□□□□ 0.98
CLIP2-205ENST00000482424 CACNA1IQ9P0X4 2223 aa21.18■□□□□ 0.98
CLIP2-205ENST00000482424 COCHO43405 550 aa21.17■□□□□ 0.98
CLIP2-205ENST00000482424 ARSAP15289 507 aa21.17■□□□□ 0.98
CLIP2-205ENST00000482424 ACO1P21399 889 aaKnown RBP21.17■□□□□ 0.98
CLIP2-205ENST00000482424 HOXD11P31277 338 aaPredicted RBP21.17■□□□□ 0.98
CLIP2-205ENST00000482424 KIF11P52732 1056 aa21.17■□□□□ 0.98
CLIP2-205ENST00000482424 DPCR1Q3MIW9 517 aa21.17■□□□□ 0.98
CLIP2-205ENST00000482424 HECTD3Q5T447 861 aa21.17■□□□□ 0.98
CLIP2-205ENST00000482424 MAMSTRQ6ZN01 415 aa21.17■□□□□ 0.98
CLIP2-205ENST00000482424 ANKRD52Q8NB46 1076 aa21.17■□□□□ 0.98
CLIP2-205ENST00000482424 GPT2Q8TD30 523 aa21.17■□□□□ 0.98
CLIP2-205ENST00000482424 CHFRQ96EP1 664 aa21.17■□□□□ 0.98
CLIP2-205ENST00000482424 CNOT6LQ96LI5 555 aaKnown RBP21.17■□□□□ 0.98
CLIP2-205ENST00000482424 PHOX2BQ99453 314 aa21.17■□□□□ 0.98
CLIP2-205ENST00000482424 IER2Q9BTL4 223 aa21.17■□□□□ 0.98
CLIP2-205ENST00000482424 LMAN1LQ9HAT1 526 aa21.17■□□□□ 0.98
CLIP2-205ENST00000482424 DUS2Q9NX74 493 aaKnown RBP21.17■□□□□ 0.98
CLIP2-205ENST00000482424 KIAA1257Q9ULG3 409 aa21.17■□□□□ 0.98
CLIP2-205ENST00000482424 CPQQ9Y646 472 aa21.17■□□□□ 0.98
CLIP2-205ENST00000482424 USP3Q9Y6I4 520 aa21.17■□□□□ 0.98
CLIP2-205ENST00000482424 PROB1E7EW31 1015 aa21.16■□□□□ 0.98
CLIP2-205ENST00000482424 ERCC5P28715 1186 aaPredicted RBP21.16■□□□□ 0.98
CLIP2-205ENST00000482424 PGFP49763 221 aa21.16■□□□□ 0.98
CLIP2-205ENST00000482424 GCNT1Q02742 428 aa21.16■□□□□ 0.98
CLIP2-205ENST00000482424 EML3Q32P44 896 aa21.16■□□□□ 0.98
CLIP2-205ENST00000482424 CT47A1Q5JQC4 288 aaPredicted RBP21.16■□□□□ 0.98
CLIP2-205ENST00000482424 ZFRQ96KR1 1074 aaKnown RBP21.16■□□□□ 0.98
CLIP2-205ENST00000482424 CHRDQ9H2X0 955 aa21.16■□□□□ 0.98
CLIP2-205ENST00000482424 ECT2Q9H8V3 914 aa21.16■□□□□ 0.98
CLIP2-205ENST00000482424 TLR8Q9NR97 1041 aaKnown RBP21.16■□□□□ 0.98
CLIP2-205ENST00000482424 FAM86C1Q9NVL1 165 aa21.16■□□□□ 0.98
CLIP2-205ENST00000482424 WNT6Q9Y6F9 365 aa21.16■□□□□ 0.98
CLIP2-205ENST00000482424 PAEPP09466 180 aa21.15■□□□□ 0.98
CLIP2-205ENST00000482424 VDRP11473 427 aa21.15■□□□□ 0.98
CLIP2-205ENST00000482424 NBL1P41271 181 aa21.15■□□□□ 0.98
CLIP2-205ENST00000482424 IFNAR2P48551 515 aa21.15■□□□□ 0.98
CLIP2-205ENST00000482424 RAB41Q5JT25 222 aa21.15■□□□□ 0.98
CLIP2-205ENST00000482424 RBM43Q6ZSC3 357 aaKnown RBP21.15■□□□□ 0.98
CLIP2-205ENST00000482424 TTC30AQ86WT1 665 aa21.15■□□□□ 0.98
CLIP2-205ENST00000482424 DDX42Q86XP3 938 aaKnown RBP eCLIP21.15■□□□□ 0.98
CLIP2-205ENST00000482424 PPM1KQ8N3J5 372 aa21.15■□□□□ 0.98
CLIP2-205ENST00000482424 KAT5Q92993 513 aa21.15■□□□□ 0.98
CLIP2-205ENST00000482424 ATP2A3Q93084 1043 aa21.15■□□□□ 0.98
CLIP2-205ENST00000482424 LINC00597Q9H2U6 94 aa21.15■□□□□ 0.98
CLIP2-205ENST00000482424 CCSER2Q9H7U1 834 aa21.15■□□□□ 0.98
CLIP2-205ENST00000482424 CYLDQ9NQC7 956 aa21.15■□□□□ 0.98
CLIP2-205ENST00000482424 DACH1Q9UI36 760 aa21.15■□□□□ 0.98
CLIP2-205ENST00000482424 FBXO4Q9UKT5 387 aa21.15■□□□□ 0.98
CLIP2-205ENST00000482424 MYO15AQ9UKN7 3530 aa21.15■□□□□ 0.98
CLIP2-205ENST00000482424 DMDP11532 3685 aa21.15■□□□□ 0.98
CLIP2-205ENST00000482424 MYO16Q9Y6X6 1858 aa21.14■□□□□ 0.97
CLIP2-205ENST00000482424 TRDMT1O14717 391 aaKnown RBP21.14■□□□□ 0.97
CLIP2-205ENST00000482424 MBL2P11226 248 aaPredicted RBP21.14■□□□□ 0.97
CLIP2-205ENST00000482424 AMPD2Q01433 879 aa21.14■□□□□ 0.97
CLIP2-205ENST00000482424 CCINQ13939 588 aa21.14■□□□□ 0.97
CLIP2-205ENST00000482424 PON2Q15165 354 aa21.14■□□□□ 0.97
CLIP2-205ENST00000482424 SGO2Q562F6 1265 aa21.14■□□□□ 0.97
CLIP2-205ENST00000482424 DGKKQ5KSL6 1271 aa21.14■□□□□ 0.97
CLIP2-205ENST00000482424 CCDC186Q7Z3E2 898 aa21.14■□□□□ 0.97
CLIP2-205ENST00000482424 ARHGEF19Q8IW93 802 aa21.14■□□□□ 0.97
CLIP2-205ENST00000482424 CPA6Q8N4T0 437 aa21.14■□□□□ 0.97
CLIP2-205ENST00000482424 ZNF276Q8N554 614 aa21.14■□□□□ 0.97
CLIP2-205ENST00000482424 JAKMIP2Q96AA8 810 aa21.14■□□□□ 0.97
CLIP2-205ENST00000482424 THAP9Q9H5L6 903 aa21.14■□□□□ 0.97
CLIP2-205ENST00000482424 SPATA6Q9NWH7 488 aaPredicted RBP21.14■□□□□ 0.97
CLIP2-205ENST00000482424 OSER1Q9NX31 292 aa21.14■□□□□ 0.97
CLIP2-205ENST00000482424 TSPAN16Q9UKR8 245 aa21.14■□□□□ 0.97
CLIP2-205ENST00000482424 CNTN6Q9UQ52 1028 aa21.14■□□□□ 0.97
CLIP2-205ENST00000482424 RNF225M0QZC1 329 aaPredicted RBP21.13■□□□□ 0.97
CLIP2-205ENST00000482424 O00370 1275 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 LAMTOR5O43504 91 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 TLR5O60602 858 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 SP9P0CG40 484 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 GJA4P35212 333 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 MTAPQ13126 283 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 LRRC32Q14392 662 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 ZNF528Q3MIS6 628 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 PKDCCQ504Y2 493 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 TMEM196Q5HYL7 178 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 TMEM270Q6UE05 265 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 PIGZQ86VD9 579 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 ADGRG2Q8IZP9 1017 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 TTC16Q8NEE8 873 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 KREMEN1Q96MU8 473 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 INTS2Q9H0H0 1204 aaKnown RBP21.13■□□□□ 0.97
CLIP2-205ENST00000482424 NMUR1Q9HB89 426 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 SMPD4Q9NXE4 827 aa21.13■□□□□ 0.97
CLIP2-205ENST00000482424 PCDHB4Q9Y5E5 795 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms