RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 M0QZ92 97 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 GAS8O95995 478 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 KCNE1P15382 129 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 ITGA8P53708 1063 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 SP3Q02447 781 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 AUHQ13825 339 aaKnown RBP15.13■□□□□ 0.01
CHD3-211ENST00000481999 ZNF268Q14587 947 aaPredicted RBP15.13■□□□□ 0.01
CHD3-211ENST00000481999 XKR4Q5GH76 650 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 TFDP3Q5H9I0 405 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 OLFML1Q6UWY5 402 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 GSTA5Q7RTV2 222 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 CALN1Q9BXU9 219 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 CCDC134Q9H6E4 229 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 NGRNQ9NPE2 291 aaKnown RBP15.13■□□□□ 0.01
CHD3-211ENST00000481999 USP18Q9UMW8 372 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 TRPV2Q9Y5S1 764 aa15.13■□□□□ 0.01
CHD3-211ENST00000481999 C2CD4BA6NLJ0 364 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 POMCP01189 267 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 ADCY8P40145 1251 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 SLCO1A2P46721 670 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 TAF6P49848 677 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 GDF10P55107 478 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 CAV1Q03135 178 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 PTK6Q13882 451 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 HP1BP3Q5SSJ5 553 aaPredicted RBP15.12■□□□□ 0.01
CHD3-211ENST00000481999 SCYL2Q6P3W7 929 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 AGMOQ6ZNB7 445 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 RCOR2Q8IZ40 523 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 ADGRF2Q8IZF7 708 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 NME8Q8N427 588 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 APPL2Q8NEU8 664 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 IPO4Q8TEX9 1081 aaKnown RBP15.12■□□□□ 0.01
CHD3-211ENST00000481999 SNF8Q96H20 258 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 PPP1R10Q96QC0 940 aaKnown RBP15.12■□□□□ 0.01
CHD3-211ENST00000481999 HOMER3Q9NSC5 361 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 PADI3Q9ULW8 664 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 NEU2Q9Y3R4 380 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 LIASO43766 372 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 CST8O60676 142 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 PLCB3Q01970 1234 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 CCDC14Q49A88 953 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 LACTB2Q53H82 288 aaPredicted RBP15.12■□□□□ 0.01
CHD3-211ENST00000481999 ZC3H12AQ5D1E8 599 aaKnown RBP15.12■□□□□ 0.01
CHD3-211ENST00000481999 PPP1R2P3Q6NXS1 205 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 RHBDF2Q6PJF5 856 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 NPNTQ6UXI9 565 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 APBB1IPQ7Z5R6 666 aaPredicted RBP15.12■□□□□ 0.01
CHD3-211ENST00000481999 CCDC33Q8N5R6 958 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 CCDC197Q8NCU1 140 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 CDC42EP4Q9H3Q1 356 aaKnown RBP15.12■□□□□ 0.01
CHD3-211ENST00000481999 SPC25Q9HBM1 224 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.12■□□□□ 0.01
CHD3-211ENST00000481999 ZNF148Q9UQR1 794 aa15.12■□□□□ 0.01
CHD3-211ENST00000481999 ARL5CA6NH57 179 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 IFNB1P01574 187 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 PECAM1P16284 738 aaPredicted RBP15.11■□□□□ 0.01
CHD3-211ENST00000481999 TAP1Q03518 808 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 CCNG2Q16589 344 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 CA9Q16790 459 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 ANKRD20A8PQ5CZ79 823 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 CCSAPQ6IQ19 270 aaPredicted RBP15.11■□□□□ 0.01
CHD3-211ENST00000481999 ANKS4BQ8N8V4 417 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 ATL2Q8NHH9 583 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 FAXDC2Q96IV6 333 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 RBM41Q96IZ5 413 aaKnown RBP15.11■□□□□ 0.01
CHD3-211ENST00000481999 RHOBTB2Q9BYZ6 727 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 FOXO6A8MYZ6 492 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 ACSL3O95573 720 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 CD4P01730 458 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 KDELR1P24390 212 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 GAD2Q05329 585 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 MGAT3Q09327 533 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 PCBP1Q15365 356 aaKnown RBP eCLIP15.11■□□□□ 0.01
CHD3-211ENST00000481999 SYCP2LQ5T4T6 812 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 TAX1BP1Q86VP1 789 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 REM2Q8IYK8 340 aaPredicted RBP15.11■□□□□ 0.01
CHD3-211ENST00000481999 ACTL9Q8TC94 416 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 SERPINB12Q96P63 405 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 UPF3AQ9H1J1 476 aaKnown RBP15.11■□□□□ 0.01
CHD3-211ENST00000481999 TSPYL2Q9H2G4 693 aaPredicted RBP15.11■□□□□ 0.01
CHD3-211ENST00000481999 SNX25Q9H3E2 840 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 TMEM30AQ9NV96 361 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 HESX1Q9UBX0 185 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 INPP5FQ9Y2H2 1132 aa15.11■□□□□ 0.01
CHD3-211ENST00000481999 CYB561D2O14569 222 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 HUS1O60921 280 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 ATF2P15336 505 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 GPD1P21695 349 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 NDUFV1P49821 464 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 ZNF143P52747 638 aaPredicted RBP15.1■□□□□ 0.01
CHD3-211ENST00000481999 PITX1P78337 314 aaPredicted RBP15.1■□□□□ 0.01
CHD3-211ENST00000481999 OTUD4Q01804 1114 aaKnown RBP15.1■□□□□ 0.01
CHD3-211ENST00000481999 P3H1Q32P28 736 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 KCTD6Q8NC69 237 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 CCT6BQ92526 530 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 KDM4CQ9H3R0 1056 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 PCDH10Q9P2E7 1040 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 TJP3O95049 919 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 TRUB2O95900 331 aaKnown RBP15.1■□□□□ 0.01
CHD3-211ENST00000481999 ATP5DP30049 168 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms