RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 ZFYVE26Q68DK2 2539 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 SETXQ7Z333 2677 aaKnown RBP11.2□□□□□ -0.62
SSBP1-210ENST00000481508 ATP8B3O60423 1300 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 PES1O00541 588 aaKnown RBP11.2□□□□□ -0.62
SSBP1-210ENST00000481508 ZNF197O14709 1029 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 PRAMEF12O95522 483 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 CFHP08603 1231 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 CSH1P0DML2 217 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 CSH2P0DML3 217 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 CD19P15391 556 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 ANXA13P27216 316 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 NBL1P41271 181 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 VIPR2P41587 438 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 SLC5A3P53794 718 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 ARHGAP44Q17R89 818 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 SKOR2Q2VWA4 1001 aaPredicted RBP11.2□□□□□ -0.62
SSBP1-210ENST00000481508 GPR158Q5T848 1215 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 ARHGAP17Q68EM7 881 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 TXNDC8Q6A555 127 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 TANGO2Q6ICL3 276 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 LEMD2Q8NC56 503 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 ZSCAN18Q8TBC5 510 aaPredicted RBP11.2□□□□□ -0.62
SSBP1-210ENST00000481508 TRMT2BQ96GJ1 504 aaKnown RBP11.2□□□□□ -0.62
SSBP1-210ENST00000481508 MYRFLQ96LU7 910 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 TTLL2Q9BWV7 592 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 DMAP1Q9NPF5 467 aaPredicted RBP11.2□□□□□ -0.62
SSBP1-210ENST00000481508 DNAJC12Q9UKB3 198 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 CNTN6Q9UQ52 1028 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 FHOD1Q9Y613 1164 aa11.2□□□□□ -0.62
SSBP1-210ENST00000481508 C2orf78A6NCI8 922 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 LGALS16A8MUM7 142 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 O00370 1275 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 MICAL2O94851 1124 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 LETM1O95202 739 aaPredicted RBP11.19□□□□□ -0.62
SSBP1-210ENST00000481508 FAM200BP0CF97 657 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 SIGLEC14Q08ET2 396 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 TAF10Q12962 218 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 TAF12Q16514 161 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 PKDCCQ504Y2 493 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 DENND5BQ6ZUT9 1274 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 DGLUCYQ7Z3D6 616 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 SLC44A3Q8N4M1 653 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 UBA3Q8TBC4 463 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 SHC3Q92529 594 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 ASB16Q96NS5 453 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 LRRC3BQ96PB8 259 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 SLC22A12Q96S37 553 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 NAA15Q9BXJ9 866 aaKnown RBP11.19□□□□□ -0.62
SSBP1-210ENST00000481508 SLC46A2Q9BY10 475 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 GMIPQ9P107 970 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 APEX2Q9UBZ4 518 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 TSPAN16Q9UKR8 245 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 SIK3Q9Y2K2 1263 aa11.19□□□□□ -0.62
SSBP1-210ENST00000481508 LRRC10BA6NIK2 292 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 FOXN3O00409 490 aaPredicted RBP11.18□□□□□ -0.62
SSBP1-210ENST00000481508 TEX33O43247 280 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 PAEPP09466 180 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 VDRP11473 427 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 KRT5P13647 590 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 NPR3P17342 541 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 CDC25CP30307 473 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 MFAP3P55082 362 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 YWHAEP62258 255 aaKnown RBP11.18□□□□□ -0.62
SSBP1-210ENST00000481508 PDE4CQ08493 712 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 GRM2Q14416 872 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 SGO2Q562F6 1265 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 KLHDC7AQ5VTJ3 777 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 VITQ6UXI7 678 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 NUP93Q8N1F7 819 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 TTC39CQ8N584 583 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 MAB21L3Q8N8X9 362 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 NDRG1Q92597 394 aaKnown RBP11.18□□□□□ -0.62
SSBP1-210ENST00000481508 NAP1L5Q96NT1 182 aaPredicted RBP11.18□□□□□ -0.62
SSBP1-210ENST00000481508 CYP2S1Q96SQ9 504 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 DUSP16Q9BY84 665 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 NAT10Q9H0A0 1025 aaKnown RBP11.18□□□□□ -0.62
SSBP1-210ENST00000481508 SLITRK6Q9H5Y7 841 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 FAM124BQ9H5Z6 455 aaPredicted RBP11.18□□□□□ -0.62
SSBP1-210ENST00000481508 GDE1Q9NZC3 331 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 IL37Q9NZH6 218 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.18□□□□□ -0.62
SSBP1-210ENST00000481508 CCL26Q9Y258 94 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 PCDHGA4Q9Y5G9 962 aa11.18□□□□□ -0.62
SSBP1-210ENST00000481508 MYOFQ9NZM1 2061 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 ZNF840PA6NDX5 716 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 SMTNL1A8MU46 457 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 CYP26A1O43174 497 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 CDK11BP21127 795 aaKnown RBP11.17□□□□□ -0.62
SSBP1-210ENST00000481508 YWHAQP27348 245 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 USP8P40818 1118 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 ZXDBP98169 803 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 DRAP1Q14919 205 aaPredicted RBP11.17□□□□□ -0.62
SSBP1-210ENST00000481508 SYCP1Q15431 976 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 DENND1BQ6P3S1 775 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 LCLAT1Q6UWP7 414 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 BHLHA9Q7RTU4 235 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 PIGZQ86VD9 579 aa11.17□□□□□ -0.62
SSBP1-210ENST00000481508 ARID3BQ8IVW6 561 aaPredicted RBP11.17□□□□□ -0.62
SSBP1-210ENST00000481508 ARL14EPQ8N8R7 260 aaPredicted RBP11.17□□□□□ -0.62
SSBP1-210ENST00000481508 TMEM105Q8N8V8 129 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms