RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 ZDHHC11BP0C7U3 371 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 MBL2P11226 248 aaPredicted RBP12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 PSMC2P35998 433 aaKnown RBP12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 ASPAP45381 313 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 NDST1P52848 882 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 CDH8P55286 799 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 DLG4P78352 724 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 ZXDBP98169 803 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 HECTD3Q5T447 861 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 HEATR6Q6AI08 1181 aaKnown RBP12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 PKN3Q6P5Z2 889 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 SCARA5Q6ZMJ2 495 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 PAQR9Q6ZVX9 377 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 CACNA2D4Q7Z3S7 1137 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 C11orf74Q86VG3 221 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 FUKQ8N0W3 1084 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 CCDC150Q8NCX0 1101 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 RPLP0P6Q8NHW5 317 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 ZC3H10Q96K80 434 aaKnown RBP12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 GTPBP4Q9BZE4 634 aaKnown RBP12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 RNF38Q9H0F5 515 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 KRT82Q9NSB4 513 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 C2orf42Q9NWW7 574 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 PCDHGA5Q9Y5G8 931 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 PLXND1Q9Y4D7 1925 aa12.86□□□□□ -0.35
SQSTM1-207ENST00000481335 MYO18AQ92614 2054 aaKnown RBP12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 SDK1Q7Z5N4 2213 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 STX10O60499 249 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 ZNF202O95125 648 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 APBB3O95704 486 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 ABL1P00519 1130 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 HLA-DRAP01903 254 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 CYP17A1P05093 508 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 FAM200BP0CF97 657 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 OPRD1P41143 372 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 RAP1GAPP47736 663 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 MRPS21P82921 87 aaKnown RBP12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 ZCWPW2Q504Y3 356 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 COBLL1Q53SF7 1204 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 C1orf220Q5T0J3 134 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 PRR23CQ6ZRP0 262 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 FILIP1Q7Z7B0 1213 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 ACOT1Q86TX2 421 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 FAM186BQ8IYM0 893 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 ADGRG2Q8IZP9 1017 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 FAM160A2Q8N612 972 aaPredicted RBP12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 KCNK16Q96T55 309 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 HNRNPABQ99729 332 aaKnown RBP12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 NT5C1AQ9BXI3 368 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 NIF3L1Q9GZT8 377 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 SDCBP2Q9H190 292 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 LINC00597Q9H2U6 94 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 FBRSL1Q9HCM7 1045 aaKnown RBP12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 TMEM8AQ9HCN3 771 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 PARD6AQ9NPB6 346 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 TLR8Q9NR97 1041 aaKnown RBP12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 SEMA4GQ9NTN9 838 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 RMND1Q9NWS8 449 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 PCDHA5Q9Y5H7 936 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 NCOR2Q9Y618 2525 aa12.85□□□□□ -0.35
SQSTM1-207ENST00000481335 NUP205Q92621 2012 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 AXIN1O15169 862 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 COCHO43405 550 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 EPN2O95208 641 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 PRR29P0C7W0 189 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 CCDC192P0DO97 292 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 GOLGA8FQ08AF8 430 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 GOLGA8DPQ0D2H9 430 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 SPEM2Q0P670 501 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 IFRD2Q12894 506 aaPredicted RBP12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 ADAM9Q13443 819 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 DMC1Q14565 340 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 DHCR24Q15392 516 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 LPAL2Q16609 132 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 GAB4Q2WGN9 574 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 KRT39Q6A163 491 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 KLHDC10Q6PID8 442 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 TTC16Q8NEE8 873 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 ZMIZ2Q8NF64 920 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 SLC2A14Q8TDB8 520 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 USP33Q8TEY7 942 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 EZH1Q92800 747 aaPredicted RBP12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 ZFRQ96KR1 1074 aaKnown RBP12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 CYLDQ9NQC7 956 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 CFAP97Q9P2B7 532 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 SH3BP1Q9Y3L3 701 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 SPTBN2O15020 2390 aa12.84□□□□□ -0.35
SQSTM1-207ENST00000481335 A0A0A0MRY4 1105 aa12.83□□□□□ -0.36
SQSTM1-207ENST00000481335 SLC30A4O14863 429 aa12.83□□□□□ -0.36
SQSTM1-207ENST00000481335 HOXC11O43248 304 aaPredicted RBP12.83□□□□□ -0.36
SQSTM1-207ENST00000481335 CILPO75339 1184 aa12.83□□□□□ -0.36
SQSTM1-207ENST00000481335 APODP05090 189 aa12.83□□□□□ -0.36
SQSTM1-207ENST00000481335 ADH5P11766 374 aa12.83□□□□□ -0.36
SQSTM1-207ENST00000481335 CCDC130P13994 396 aa12.83□□□□□ -0.36
SQSTM1-207ENST00000481335 PSEN1P49768 467 aa12.83□□□□□ -0.36
SQSTM1-207ENST00000481335 LIMK1P53667 647 aa12.83□□□□□ -0.36
SQSTM1-207ENST00000481335 ATXN1P54253 815 aaKnown RBP12.83□□□□□ -0.36
SQSTM1-207ENST00000481335 GAD2Q05329 585 aa12.83□□□□□ -0.36
SQSTM1-207ENST00000481335 SRSF5Q13243 272 aaKnown RBP12.83□□□□□ -0.36
SQSTM1-207ENST00000481335 BECN1Q14457 450 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms