RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 GAB4Q2WGN9 574 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 ARHGAP29Q52LW3 1261 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 PKN3Q6P5Z2 889 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 FOXR2Q6PJQ5 311 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 ZNF852Q6ZMS4 543 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 SCD5Q86SK9 330 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 SFTPA1Q8IWL2 248 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 CCDC150Q8NCX0 1101 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 UBA3Q8TBC4 463 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 CSGALNACT1Q8TDX6 532 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 EZH1Q92800 747 aaPredicted RBP12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 ATOH1Q92858 354 aaPredicted RBP12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 E2F7Q96AV8 911 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 CLDN23Q96B33 292 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 P2RY11Q96G91 374 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 SHDQ96IW2 340 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 TRPV5Q9NQA5 729 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 ARHGAP26Q9UNA1 814 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 ATP8B3O60423 1300 aa12.06□□□□□ -0.48
RAPGEF1-207ENST00000481260 GPR179Q6PRD1 2367 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 A0A1W2PQH9 124 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 FAM92AA1XBS5 289 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 PIK3R2O00459 728 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 AFPP02771 609 aaKnown RBP12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 IRF1P10914 325 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 CHRNB1P11230 501 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 SLC9A1P19634 815 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 BRD2P25440 801 aaKnown RBP12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 PPP1R2P41236 205 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 PTPN5P54829 565 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 SLC7A9P82251 487 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 MTAPQ13126 283 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 EML3Q32P44 896 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 BHLHA9Q7RTU4 235 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 ALYREFQ86V81 257 aaKnown RBP12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 PPM1KQ8N3J5 372 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 MLKLQ8NB16 471 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 EHBP1Q8NDI1 1231 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 DUSP16Q9BY84 665 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 LMAN1LQ9HAT1 526 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 SAMSN1Q9NSI8 373 aaKnown RBP12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 DUS2Q9NX74 493 aaKnown RBP12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 CFAP97Q9P2B7 532 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 R4GN57 208 aa12.05□□□□□ -0.48
RAPGEF1-207ENST00000481260 PATJQ8NI35 1801 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 PMM2O15305 246 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 RTN3O95197 1032 aaPredicted RBP12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 PNMA6AP0CW24 399 aaPredicted RBP12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 MBL2P11226 248 aaPredicted RBP12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 CD19P15391 556 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 KIF11P52732 1056 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 PDE4CQ08493 712 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 DMWDQ09019 674 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 RUNX3Q13761 415 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 ITPRIPL2Q3MIP1 535 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 ARHGAP17Q68EM7 881 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 FSTL4Q6MZW2 842 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 DPY19L2P1Q6NXN4 242 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 TMEM270Q6UE05 265 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 C11orf57Q6ZUT1 292 aaPredicted RBP12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 PIGZQ86VD9 579 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 C1orf210Q8IVY1 113 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 OSCP1Q8WVF1 389 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 CEP295NLQ96MC4 621 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 NT5C1BQ96P26 610 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 SLITRK1Q96PX8 696 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 SPATA6Q9NWH7 488 aaPredicted RBP12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 TSPAN16Q9UKR8 245 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 SCML2Q9UQR0 700 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 PCDHB4Q9Y5E5 795 aa12.04□□□□□ -0.48
RAPGEF1-207ENST00000481260 FAM170AA1A519 330 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 O00370 1275 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 GREM1O60565 184 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 EGFP01133 1207 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 SP9P0CG40 484 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 GJA4P35212 333 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 RGS7P49802 495 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 ZNF132P52740 706 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 SATB1Q01826 763 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 PKDCCQ504Y2 493 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 MIIPQ5JXC2 388 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 HECTD3Q5T447 861 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 SNX30Q5VWJ9 437 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 RBM43Q6ZSC3 357 aaKnown RBP12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 C12orf40Q86WS4 652 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 RBBP8NLQ8NC74 664 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 KCNH6Q9H252 994 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 ECT2Q9H8V3 914 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 KIF9Q9HAQ2 790 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 SIX2Q9NPC8 291 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 UBE2TQ9NPD8 197 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 USP3Q9Y6I4 520 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 MIA3Q5JRA6 1907 aa12.03□□□□□ -0.48
RAPGEF1-207ENST00000481260 HELZP42694 1942 aaKnown RBP12.02□□□□□ -0.49
RAPGEF1-207ENST00000481260 DMXL1Q9Y485 3027 aa12.02□□□□□ -0.49
RAPGEF1-207ENST00000481260 SOBPA7XYQ1 873 aa12.02□□□□□ -0.49
RAPGEF1-207ENST00000481260 BECN2A8MW95 431 aa12.02□□□□□ -0.49
RAPGEF1-207ENST00000481260 TLR5O60602 858 aa12.02□□□□□ -0.49
RAPGEF1-207ENST00000481260 GNA14O95837 355 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms