RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 STK17AQ9UEE5 414 aa10.09□□□□□ -0.79
SMARCE1-210ENST00000481231 SIX4Q9UIU6 781 aa10.09□□□□□ -0.79
SMARCE1-210ENST00000481231 FBXO2Q9UK22 296 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-210ENST00000481231 GTF3C4Q9UKN8 822 aa10.09□□□□□ -0.79
SMARCE1-210ENST00000481231 ITGA11Q9UKX5 1188 aa10.09□□□□□ -0.79
SMARCE1-210ENST00000481231 EXOC7Q9UPT5 735 aa10.09□□□□□ -0.79
SMARCE1-210ENST00000481231 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-210ENST00000481231 PI4KAP42356 2102 aa10.09□□□□□ -0.79
SMARCE1-210ENST00000481231 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 TRAV19A0A0A6YYK7 116 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 GOLGA8IPA6NC78 632 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 GOLGA8JA6NMD2 632 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 ADAM23O75077 832 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 GCNT3O95395 438 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 USP17L7P0C7H9 530 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 GARTP22102 1010 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 EIF2S3P41091 472 aaKnown RBP10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 MYL7Q01449 175 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 FAM160A1Q05DH4 1040 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 SRSF1Q07955 248 aaKnown RBP eCLIP10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 GAB4Q2WGN9 574 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 CFAP221Q4G0U5 840 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 CCDC157Q569K6 752 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 RRAGBQ5VZM2 374 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 SCN4BQ8IWT1 228 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 ADGRF2Q8IZF7 708 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 CSGALNACT2Q8N6G5 542 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 TOP6BLQ8N6T0 577 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 TRIML1Q8N9V2 468 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 CCDC26Q8TAB7 109 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 CACTINQ8WUQ7 758 aaKnown RBP10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 ERLEC1Q96DZ1 483 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 CLIC6Q96NY7 704 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 MTMR12Q9C0I1 747 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 TMEM206Q9H813 350 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 PDE11AQ9HCR9 933 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 GDAP2Q9NXN4 497 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 GCNT4Q9P109 453 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 KIAA1522Q9P206 1035 aaPredicted RBP10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 DNMT3LQ9UJW3 386 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 SNX9Q9Y5X1 595 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 CLIC4Q9Y696 253 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 ATMQ13315 3056 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 MUC22E2RYF6 1773 aaPredicted RBP10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 ANK1P16157 1881 aa10.08□□□□□ -0.8
SMARCE1-210ENST00000481231 A0A1W2PQD8 194 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 FRMD3A2A2Y4 597 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 VPS37CA5D8V6 355 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 C2orf78A6NCI8 922 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 PLK4O00444 970 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 GABRDO14764 452 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 TLX3O43711 291 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 ATP2C2O75185 946 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 DKK1O94907 266 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 KRT19P08727 400 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 PCSK1P29120 753 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 LHX1P48742 406 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 MRPS21P82921 87 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 RBP5P82980 135 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 KCNC4Q03721 635 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 BYSLQ13895 437 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 SOWAHAQ2M3V2 549 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 SV2BQ7L1I2 683 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 LIMS2Q7Z4I7 341 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 SPATA2LQ8IUW3 424 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 RGL4Q8IZJ4 473 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 SYCP3Q8IZU3 236 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 PDCD7Q8N8D1 485 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 ARL14EPQ8N8R7 260 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 FAM181AQ8N9Y4 354 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 BAHD1Q8TBE0 780 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 SPATA18Q8TC71 538 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 SH3RF2Q8TEC5 729 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 NOC3LQ8WTT2 800 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 FUBP3Q96I24 572 aaKnown RBP eCLIP10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 PCIF1Q9H4Z3 704 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 CD93Q9NPY3 652 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 OLFML3Q9NRN5 406 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 CALCOCO1Q9P1Z2 691 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 CCDC39Q9UFE4 941 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 PCDHB13Q9Y5F0 798 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 SRPRBQ9Y5M8 271 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 PTPRJQ12913 1337 aa10.07□□□□□ -0.8
SMARCE1-210ENST00000481231 HELZP42694 1942 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-210ENST00000481231 IGHV1OR15-9A0A0B4J2B8 117 aa10.06□□□□□ -0.8
SMARCE1-210ENST00000481231 SCAMP3O14828 347 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-210ENST00000481231 LDHAP00338 332 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-210ENST00000481231 TMEM191BP0C7N4 346 aa10.06□□□□□ -0.8
SMARCE1-210ENST00000481231 HLA-EP13747 358 aa10.06□□□□□ -0.8
SMARCE1-210ENST00000481231 IDEP14735 1019 aa10.06□□□□□ -0.8
SMARCE1-210ENST00000481231 GABRG2P18507 467 aa10.06□□□□□ -0.8
SMARCE1-210ENST00000481231 LMO2P25791 158 aa10.06□□□□□ -0.8
SMARCE1-210ENST00000481231 MAOBP27338 520 aa10.06□□□□□ -0.8
SMARCE1-210ENST00000481231 TXLNAP40222 546 aa10.06□□□□□ -0.8
SMARCE1-210ENST00000481231 MAGEA11P43364 429 aa10.06□□□□□ -0.8
SMARCE1-210ENST00000481231 SLC6A11P48066 632 aa10.06□□□□□ -0.8
SMARCE1-210ENST00000481231 CLDN6P56747 220 aa10.06□□□□□ -0.8
SMARCE1-210ENST00000481231 PSMC1P62191 440 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-210ENST00000481231 SEMG2Q02383 582 aa10.06□□□□□ -0.8
SMARCE1-210ENST00000481231 KDSRQ06136 332 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms