RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 COASYQ13057 564 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 NR1H3Q13133 447 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 TFDP1Q14186 410 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 SELPLGQ14242 412 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 PLA2G4EQ3MJ16 856 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 EARS2Q5JPH6 523 aaKnown RBP10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 SLC10A5Q5PT55 438 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 PPP4R3CPQ6ZMV5 832 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 C15orf52Q6ZUT6 534 aaKnown RBP10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 AMIGO2Q86SJ2 522 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 IGFN1Q86VF2 1251 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 SLC15A4Q8N697 577 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 Q8N9G6 341 aaPredicted RBP10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 PJA1Q8NG27 643 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 DENND1AQ8TEH3 1009 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 SLC7A3Q8WY07 619 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 VTI1AQ96AJ9 217 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 DCUN1D1Q96GG9 259 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 GCNAQ96QF7 691 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 TRIM51Q9BSJ1 452 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 CELF4Q9BZC1 486 aaKnown RBP10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 ARHGEF4Q9NR80 690 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 GJB4Q9NTQ9 266 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 GRHL1Q9NZI5 618 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 APPL1Q9UKG1 709 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 MAU2Q9Y6X3 613 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 CRB1P82279 1406 aa10.75□□□□□ -0.69
PRPF4B-206ENST00000481109 ZNF335Q9H4Z2 1342 aaPredicted RBP10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 ZMYM2Q9UBW7 1377 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 TMEM2Q9UHN6 1383 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 TYW5A2RUC4 315 aaKnown RBP10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 LRRC72A6NJI9 287 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 A8MU76 341 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 E7EWF7 191 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 ATP6V1G2-DDX39BF2Z307 99 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 VWA5AO00534 786 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 PI15O43692 258 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 EPN2O95208 641 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 ITGA4P13612 1032 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 KCNA6P17658 529 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 TGM1P22735 817 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 DNA2P51530 1060 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 RHAGQ02094 409 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 SNX17Q15036 470 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 MCMDC2Q4G0Z9 681 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 EFHC1Q5JVL4 640 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 EPM2AIP1Q7L775 607 aaPredicted RBP10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 ADGRG5Q8IZF4 528 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 METTL13Q8N6R0 699 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 HSPH1Q92598 858 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 TARS2Q9BW92 718 aaKnown RBP10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 C1QTNF7Q9BXJ2 289 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 UCKL1Q9NWZ5 548 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 TMEM9Q9P0T7 183 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 FNIP2Q9P278 1114 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 ARMCX3Q9UH62 379 aaPredicted RBP10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 PACSIN2Q9UNF0 486 aaPredicted RBP10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 TECPR2O15040 1411 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 ADAMTS13Q76LX8 1427 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 TNRQ92752 1358 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 PEAK1Q9H792 1746 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 C19orf81C9J6K1 198 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 PODXLO00592 558 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 FOXP2O15409 715 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 DYRK3O43781 588 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 MAN1A1P33908 653 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 EVA1CP58658 441 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 GPR85P60893 370 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 GALNT2Q10471 571 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 TARDBPQ13148 414 aaKnown RBP eCLIP10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 OASLQ15646 514 aaKnown RBP10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 LRRC36Q1X8D7 754 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 LRIT3Q3SXY7 679 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 FAM26DQ5JW98 314 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 IYDQ6PHW0 289 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 OTOAQ7RTW8 1153 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 SRRM1Q8IYB3 904 aaKnown RBP10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 LRRC57Q8N9N7 239 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 ATP2A3Q93084 1043 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 TMIGD2Q96BF3 282 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 PCMTD1Q96MG8 357 aaPredicted RBP10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 ZNF347Q96SE7 839 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 RMDN3Q96TC7 470 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 EYA1Q99502 592 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 TSEN34Q9BSV6 310 aaKnown RBP10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 QTRT2Q9H974 415 aaKnown RBP10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 KANSL3Q9P2N6 904 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 BCAP29Q9UHQ4 241 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 CORINQ9Y5Q5 1042 aa10.74□□□□□ -0.69
PRPF4B-206ENST00000481109 KIF13AQ9H1H9 1805 aa10.73□□□□□ -0.69
PRPF4B-206ENST00000481109 FOXN3O00409 490 aaPredicted RBP10.73□□□□□ -0.69
PRPF4B-206ENST00000481109 TOM1O60784 492 aa10.73□□□□□ -0.69
PRPF4B-206ENST00000481109 POLR2MP0CAP2 368 aa10.73□□□□□ -0.69
PRPF4B-206ENST00000481109 MTHFD1P11586 935 aaKnown RBP10.73□□□□□ -0.69
PRPF4B-206ENST00000481109 CDC20Q12834 499 aa10.73□□□□□ -0.69
PRPF4B-206ENST00000481109 ANKRD26P1Q6NSI1 321 aa10.73□□□□□ -0.69
PRPF4B-206ENST00000481109 TTC27Q6P3X3 843 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms