RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 TTF1Q15361 905 aaPredicted RBP2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 FAM187BQ17R55 369 aa2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 ZIK1Q3SY52 487 aaPredicted RBP2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 EMC10Q5UCC4 262 aa2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 EPM2AIP1Q7L775 607 aaPredicted RBP2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 USP37Q86T82 979 aa2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 ZBTB46Q86UZ6 589 aa2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 TPH2Q8IWU9 490 aa2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 FAM46DQ8NEK8 389 aa2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 DIS3LQ8TF46 1054 aaKnown RBP2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 TNPO1Q92973 898 aaKnown RBP2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 MED30Q96HR3 178 aa2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 NLRP4Q96MN2 994 aa2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 FYTTD1Q96QD9 318 aaKnown RBP2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 CGRRF1Q99675 332 aa2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 WDCPQ9H6R7 721 aa2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 ATP6V0A4Q9HBG4 840 aa2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 PNPOQ9NVS9 261 aa2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 DDX56Q9NY93 547 aaKnown RBP2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 TFCP2L1Q9NZI6 479 aa2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 HESX1Q9UBX0 185 aa2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 ZDHHC8Q9ULC8 765 aa2.35□□□□□ -2.03
R3HDM1-214ENST00000480793 SCN5AQ14524 2016 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 IGLV5-39A0A0G2JS06 123 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 ANKRD62A6NC57 917 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 A6NNZ2 444 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 ERC2O15083 957 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 SLC16A6O15403 523 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 GCATO75600 419 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 PDE8BO95263 885 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 SYF2O95926 243 aaKnown RBP2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 FESP07332 822 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 MYBP10242 640 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 NPR1P16066 1061 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 CCND1P24385 295 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 AKAP5P24588 427 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 GCLCP48506 637 aaPredicted RBP2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 RAB27AP51159 221 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 ALDH5A1P51649 535 aaPredicted RBP2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 ARFIP2P53365 341 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 RPS13P62277 151 aaKnown RBP2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 PIN1Q13526 163 aaPredicted RBP2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 Q6ZWC4 215 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 FBXL14Q8N1E6 418 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 ADAMTS18Q8TE60 1221 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 NUDCD2Q8WVJ2 157 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 MAML1Q92585 1016 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 SLC35A4Q96G79 324 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 SLC46A1Q96NT5 459 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 TAAR9Q96RI9 348 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 NUP88Q99567 741 aaPredicted RBP2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 CNPPD1Q9BV87 410 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 CIPCQ9C0C6 399 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 ARHGAP39Q9C0H5 1083 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 PLSCR4Q9NRQ2 329 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 CFAP97Q9P2B7 532 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 STAP2Q9UGK3 403 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 FEZ2Q9UHY8 353 aaPredicted RBP2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 PCDHA6Q9UN73 950 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 POLHQ9Y253 713 aa2.34□□□□□ -2.03
R3HDM1-214ENST00000480793 TP53BP1Q12888 1972 aaPredicted RBP2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 A0A088AWK7 358 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 FOXN3O00409 490 aaPredicted RBP2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 TBC1D4O60343 1298 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 TJP3O95049 919 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 UNC5CO95185 931 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 ARIH2O95376 493 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 CHEK2O96017 543 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 CSF1RP07333 972 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 DLDP09622 509 aaKnown RBP2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 CTSAP10619 480 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 TCEA1P23193 301 aaKnown RBP2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 THBS4P35443 961 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 TAF6P49848 677 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 PGGT1BP53609 377 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 SOX8P57073 446 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 LILRA4P59901 499 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 RAB1AP62820 205 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 MTX1Q13505 466 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 LCE3AQ5TA76 89 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 ICE2Q659A1 982 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 SFRP4Q6FHJ7 346 aaPredicted RBP2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 MTHFD1LQ6UB35 978 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 TMEM108Q6UXF1 575 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 OVCH2Q7RTZ1 564 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 ZNF280BQ86YH2 543 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 SPATA2LQ8IUW3 424 aaPredicted RBP2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 GRAMD1CQ8IYS0 662 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 ZNF398Q8TD17 642 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 ASB5Q8WWX0 329 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 MAP4K1Q92918 833 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 RUNDC1Q96C34 613 aa2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 P2RX7Q99572 595 aaKnown RBP2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 ACO2Q99798 780 aaKnown RBP2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 NTPCRQ9BSD7 190 aaKnown RBP2.33□□□□□ -2.04
R3HDM1-214ENST00000480793 DPH1Q9BZG8 443 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms