RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 SREBF1P36956 1147 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 ALDH18A1P54886 795 aaKnown RBP8.82□□□□□ -1
SNRNP200-203ENST00000480242 CAV1Q03135 178 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 TBL3Q12788 808 aaKnown RBP8.82□□□□□ -1
SNRNP200-203ENST00000480242 PDIA2Q13087 525 aaKnown RBP8.82□□□□□ -1
SNRNP200-203ENST00000480242 MTMR1Q13613 665 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 MTERF2Q49AM1 385 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 ANKRD20A4Q4UJ75 823 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 RABGAP1LQ5R372 815 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 MAP1SQ66K74 1059 aaPredicted RBP8.82□□□□□ -1
SNRNP200-203ENST00000480242 ANKMY2Q8IV38 441 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 FAM186BQ8IYM0 893 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 EFCAB3Q8N7B9 438 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 POU5F2Q8N7G0 328 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 ICA1LQ8NDH6 482 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 SHCBP1Q8NEM2 672 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 FAM172AQ8WUF8 416 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 ERLEC1Q96DZ1 483 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 WNK4Q96J92 1243 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 PRPF18Q99633 342 aaKnown RBP8.82□□□□□ -1
SNRNP200-203ENST00000480242 HERPUD2Q9BSE4 406 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 TEKT3Q9BXF9 490 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 KCNK13Q9HB14 408 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 GPRC5CQ9NQ84 441 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 ARHGEF4Q9NR80 690 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 MORF4L1Q9UBU8 362 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 MARCOQ9UEW3 520 aaPredicted RBP8.82□□□□□ -1
SNRNP200-203ENST00000480242 FEM1BQ9UK73 627 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 PCDHGB4Q9UN71 923 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 PCDHGB5Q9Y5G0 923 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 GOLGA8SH3BPF8 625 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 GOLGA8MH3BSY2 632 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 K7ENM7 598 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 STRNO43815 780 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 BANF1O75531 89 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 SMIM18P0DKX4 95 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 BGNP21810 368 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 HOXD13P35453 343 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 GEMIN4P57678 1058 aaKnown RBP8.82□□□□□ -1
SNRNP200-203ENST00000480242 PPIL2Q13356 520 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 PDE1CQ14123 709 aaPredicted RBP8.82□□□□□ -1
SNRNP200-203ENST00000480242 LPIN1Q14693 890 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 C16orf72Q14CZ0 275 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 CBWD6Q4V339 395 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 CBWD3Q5JTY5 395 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 CBWD5Q5RIA9 395 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 PRPF39Q86UA1 669 aaKnown RBP8.82□□□□□ -1
SNRNP200-203ENST00000480242 ZBED8Q8IZ13 594 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 IL31RAQ8NI17 732 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 ETNPPLQ8TBG4 499 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 GIPC3Q8TF64 312 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 GRK7Q8WTQ7 553 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 S100A14Q9HCY8 104 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 ZNF148Q9UQR1 794 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 EFR3BQ9Y2G0 817 aa8.82□□□□□ -1
SNRNP200-203ENST00000480242 ATP8B3O60423 1300 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 HTR3EA5X5Y0 456 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 SORBS2O94875 1100 aaKnown RBP8.81□□□□□ -1
SNRNP200-203ENST00000480242 COL6A2P12110 1019 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 SLC5A2P31639 672 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 CA8P35219 290 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 HALP42357 657 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 FMO5P49326 533 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 PEX3P56589 373 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 ZNF200P98182 395 aaPredicted RBP8.81□□□□□ -1
SNRNP200-203ENST00000480242 HNRNPDQ14103 355 aaKnown RBP8.81□□□□□ -1
SNRNP200-203ENST00000480242 GRM2Q14416 872 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 KRT72Q14CN4 511 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 EFTUD2Q15029 972 aaKnown RBP eCLIP8.81□□□□□ -11e-6■■■■■ 30.2
SNRNP200-203ENST00000480242 SUPT20HL1Q3ZLR7 823 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 ARSHQ5FYA8 562 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 UGT2A3Q6UWM9 527 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 RNF111Q6ZNA4 994 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 C12orf50Q8NA57 414 aaPredicted RBP8.81□□□□□ -1
SNRNP200-203ENST00000480242 RAB3IL1Q8TBN0 382 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 FAM84AQ96KN4 292 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 CNBD2Q96M20 576 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 RILPQ96NA2 401 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 STRA6Q9BX79 667 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 PLVAPQ9BX97 442 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 SHCBP1LQ9BZQ2 653 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 INTS2Q9H0H0 1204 aaKnown RBP8.81□□□□□ -1
SNRNP200-203ENST00000480242 UBE2TQ9NPD8 197 aaPredicted RBP8.81□□□□□ -1
SNRNP200-203ENST00000480242 SENP1Q9P0U3 644 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 ARHGAP10A1A4S6 786 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.81□□□□□ -1
SNRNP200-203ENST00000480242 FKBP6O75344 327 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 LYPLA2O95372 231 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 STAMBPO95630 424 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 PDGFRBP09619 1106 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 PORP16435 677 aaPredicted RBP8.81□□□□□ -1
SNRNP200-203ENST00000480242 PTPRAP18433 802 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 STT3AP46977 705 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 SLC25A3Q00325 362 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 PDE1BQ01064 536 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 ZNF467Q7Z7K2 595 aaPredicted RBP8.81□□□□□ -1
SNRNP200-203ENST00000480242 NUP93Q8N1F7 819 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 LRRC43Q8N309 656 aa8.81□□□□□ -1
SNRNP200-203ENST00000480242 TAB3Q8N5C8 712 aaPredicted RBP8.81□□□□□ -1
SNRNP200-203ENST00000480242 ZNF280CQ8ND82 737 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms