RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 NOP9Q86U38 636 aaKnown RBP20.79■□□□□ 0.92
LIME1-205ENST00000480139 SMARCD2Q92925 531 aa20.79■□□□□ 0.92
LIME1-205ENST00000480139 ASB16Q96NS5 453 aa20.79■□□□□ 0.92
LIME1-205ENST00000480139 SLITRK6Q9H5Y7 841 aa20.79■□□□□ 0.92
LIME1-205ENST00000480139 LRRC4Q9HBW1 653 aa20.79■□□□□ 0.92
LIME1-205ENST00000480139 TLR8Q9NR97 1041 aaKnown RBP20.79■□□□□ 0.92
LIME1-205ENST00000480139 IGSF9Q9P2J2 1179 aa20.79■□□□□ 0.92
LIME1-205ENST00000480139 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.79■□□□□ 0.927e-11■■■■■ 38.8
LIME1-205ENST00000480139 LRRC53A6NM62 1247 aa20.78■□□□□ 0.92
LIME1-205ENST00000480139 LSM8O95777 96 aaKnown RBP20.78■□□□□ 0.92
LIME1-205ENST00000480139 SSTR3P32745 418 aaPredicted RBP20.78■□□□□ 0.92
LIME1-205ENST00000480139 CDH5P33151 784 aaPredicted RBP20.78■□□□□ 0.92
LIME1-205ENST00000480139 ACADSBP45954 432 aa20.78■□□□□ 0.92
LIME1-205ENST00000480139 PSEN1P49768 467 aa20.78■□□□□ 0.92
LIME1-205ENST00000480139 TUBP50607 506 aa20.78■□□□□ 0.92
LIME1-205ENST00000480139 HTR4Q13639 388 aa20.78■□□□□ 0.92
LIME1-205ENST00000480139 FAM78AQ5JUQ0 283 aa20.78■□□□□ 0.92
LIME1-205ENST00000480139 SPECC1LQ69YQ0 1117 aa20.78■□□□□ 0.92
LIME1-205ENST00000480139 VSTM4Q8IW00 320 aa20.78■□□□□ 0.92
LIME1-205ENST00000480139 ZSCAN18Q8TBC5 510 aaPredicted RBP20.78■□□□□ 0.92
LIME1-205ENST00000480139 ZSWIM3Q96MP5 696 aa20.78■□□□□ 0.92
LIME1-205ENST00000480139 SLC4A5Q9BY07 1137 aa20.78■□□□□ 0.92
LIME1-205ENST00000480139 SLC46A2Q9BY10 475 aa20.78■□□□□ 0.92
LIME1-205ENST00000480139 NUCKS1Q9H1E3 243 aaKnown RBP20.78■□□□□ 0.92
LIME1-205ENST00000480139 CNGB3Q9NQW8 809 aa20.78■□□□□ 0.92
LIME1-205ENST00000480139 AIPL1Q9NZN9 384 aa20.78■□□□□ 0.92
LIME1-205ENST00000480139 GMIPQ9P107 970 aa20.78■□□□□ 0.92
LIME1-205ENST00000480139 CEP83Q9Y592 693 aa20.78■□□□□ 0.92
LIME1-205ENST00000480139 HELZP42694 1942 aaKnown RBP20.78■□□□□ 0.92
LIME1-205ENST00000480139 OLFM2O95897 454 aa20.77■□□□□ 0.92
LIME1-205ENST00000480139 ZBED1O96006 694 aa20.77■□□□□ 0.92
LIME1-205ENST00000480139 CDR2Q01850 454 aa20.77■□□□□ 0.92
LIME1-205ENST00000480139 ADIGQ0VDE8 80 aa20.77■□□□□ 0.92
LIME1-205ENST00000480139 TRIM14Q14142 442 aa20.77■□□□□ 0.92
LIME1-205ENST00000480139 TXNDC8Q6A555 127 aa20.77■□□□□ 0.92
LIME1-205ENST00000480139 CMTM8Q8IZV2 173 aa20.77■□□□□ 0.92
LIME1-205ENST00000480139 SIX6OS1Q8N1H7 587 aa20.77■□□□□ 0.92
LIME1-205ENST00000480139 ARHGAP18Q8N392 663 aa20.77■□□□□ 0.92
LIME1-205ENST00000480139 ZNF276Q8N554 614 aa20.77■□□□□ 0.92
LIME1-205ENST00000480139 E2F7Q96AV8 911 aa20.77■□□□□ 0.92
LIME1-205ENST00000480139 NECAB3Q96P71 396 aaPredicted RBP20.77■□□□□ 0.92
LIME1-205ENST00000480139 NOX5Q96PH1 765 aa20.77■□□□□ 0.92
LIME1-205ENST00000480139 LIMD1Q9UGP4 676 aa20.77■□□□□ 0.92
LIME1-205ENST00000480139 CAPN11Q9UMQ6 739 aa20.77■□□□□ 0.92
LIME1-205ENST00000480139 TRAV19A0A0A6YYK7 116 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 AP5Z1O43299 807 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 ECI2O75521 394 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 GABBR2O75899 941 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 FBXO21O94952 628 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 OAS1P00973 400 aaKnown RBP20.76■□□□□ 0.91
LIME1-205ENST00000480139 GYPCP04921 128 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 FCARP24071 287 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 ZBED6P86452 979 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 PDCLQ13371 301 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 ZNF268Q14587 947 aaPredicted RBP20.76■□□□□ 0.91
LIME1-205ENST00000480139 IRF2BP2Q7Z5L9 587 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 TMEM110Q86TL2 294 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 WDTC1Q8N5D0 677 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 MAB21L3Q8N8X9 362 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 TMEM35BQ8NCS4 154 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 ZNF397Q8NF99 534 aaPredicted RBP20.76■□□□□ 0.91
LIME1-205ENST00000480139 IRGQQ8WZA9 623 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 SYN2Q92777 582 aaPredicted RBP20.76■□□□□ 0.91
LIME1-205ENST00000480139 ELSPBP1Q96BH3 223 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 ULBP1Q9BZM6 244 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 TRIM5Q9C035 493 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 PDCL3Q9H2J4 239 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 KCNK12Q9HB15 430 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 CD320Q9NPF0 282 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 OBP2AQ9NY56 170 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 CLIC5Q9NZA1 410 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 CHORDC1Q9UHD1 332 aaPredicted RBP20.76■□□□□ 0.91
LIME1-205ENST00000480139 CYTH4Q9UIA0 394 aa20.76■□□□□ 0.91
LIME1-205ENST00000480139 NCOR1O75376 2440 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 C2orf78A6NCI8 922 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 MMEP08473 750 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 USP17L7P0C7H9 530 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 AVPR1AP37288 418 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 PRKCIP41743 596 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 RGS7P49802 495 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 PLCB2Q00722 1185 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 HECTD3Q5T447 861 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 SFMBT2Q5VUG0 894 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 TAF3Q5VWG9 929 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 PARM1Q6UWI2 310 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 TRIM72Q6ZMU5 477 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 BHLHA9Q7RTU4 235 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 RNF135Q8IUD6 432 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 PASD1Q8IV76 773 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 ARID3BQ8IVW6 561 aaPredicted RBP20.75■□□□□ 0.91
LIME1-205ENST00000480139 SLC20A1Q8WUM9 679 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 FGF14Q92915 247 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 KIF9Q9HAQ2 790 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 ZFP14Q9HCL3 533 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 NUMBLQ9Y6R0 609 aa20.75■□□□□ 0.91
LIME1-205ENST00000480139 VCANP13611 3396 aa20.74■□□□□ 0.91
LIME1-205ENST00000480139 BDP1A6H8Y1 2624 aa20.74■□□□□ 0.91
LIME1-205ENST00000480139 SART1O43290 800 aaKnown RBP20.74■□□□□ 0.91
LIME1-205ENST00000480139 CHRNB2P17787 502 aa20.74■□□□□ 0.91
LIME1-205ENST00000480139 SNX16P57768 344 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms