RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 GLI1P08151 1106 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 H2AFZP0C0S5 128 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 SPATA31D3P0C874 917 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 HMGA1P17096 107 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 VAV2P52735 878 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 EPHA5P54756 1037 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 GALCP54803 685 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 DAOAP59103 153 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 USP46P62068 366 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 MRPS5P82675 430 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 TCEAL1Q15170 157 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 CTC1Q2NKJ3 1217 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 SDHAF4Q5VUM1 108 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 PLEKHA7Q6IQ23 1121 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 ZNF662Q6ZS27 426 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 SPATA31D4Q6ZUB0 917 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 TOGARAM2Q6ZUX3 1019 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 FAM183BPQ6ZVS7 135 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 H2AFVQ71UI9 128 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 SLC26A9Q7LBE3 791 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 ARCQ7LC44 396 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 BHLHA9Q7RTU4 235 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 ELMOD1Q8N336 334 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 LEMD2Q8NC56 503 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 ACRBPQ8NEB7 543 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 PDZD8Q8NEN9 1154 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 CTNNBL1Q8WYA6 563 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 ZNF653Q96CK0 615 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 ULBP1Q9BZM6 244 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 SYNCQ9H7C4 482 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 UXTQ9UBK9 157 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 SCML2Q9UQR0 700 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 PCDHA13Q9Y5I0 950 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 SCINQ9Y6U3 715 aa13.19□□□□□ -0.3
TRAPPC12-218ENST00000479897 BRWD1Q9NSI6 2320 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 BTNL10A8MVZ5 291 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 XYLBO75191 536 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 CYP1A2P05177 515 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 CCDC175P0C221 793 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 ZDHHC11BP0C7U3 371 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 HOXB8P17481 243 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 YWHAQP27348 245 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 GTF2F1P35269 517 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 MAGEA1P43355 309 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 PSEN1P49768 467 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 SLC6A3Q01959 620 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 ADAM15Q13444 863 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 PPP1R15BQ5SWA1 713 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 CYP4A22Q5TCH4 519 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 SNX30Q5VWJ9 437 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 LLGL2Q6P1M3 1020 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 BEND5Q7L4P6 421 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 TMC8Q8IU68 726 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 SCAMP5Q8TAC9 235 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 GIPC2Q8TF65 315 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 ZNF707Q96C28 371 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 SLITRK1Q96PX8 696 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 DESI2Q9BSY9 194 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 TRIM62Q9BVG3 475 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 PACSIN1Q9BY11 444 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 LRRC3Q9BY71 257 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 PRKD2Q9BZL6 878 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 THAP2Q9H0W7 228 aa13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRAPPC12-218ENST00000479897 DOCK6Q96HP0 2047 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 A0A0A6YYK5 440 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 HSF2BPO75031 334 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 RFPL2O75678 378 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 MTA2O94776 668 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 FGF19O95750 216 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 LCP1P13796 627 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 ABCB4P21439 1286 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 RRM1P23921 792 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 PPP3CCP48454 512 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 GPC5P78333 572 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 RBM10P98175 930 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 MTMR3Q13615 1198 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 C2CD6Q53TS8 623 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 EFHC1Q5JVL4 640 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 OR6B2Q6IFH4 312 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 ANKRD54Q6NXT1 300 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 DNAJC24Q6P3W2 148 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 DNAJB7Q7Z6W7 309 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 MON1AQ86VX9 555 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 RHOT2Q8IXI1 618 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 ARHGAP18Q8N392 663 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 ZNF276Q8N554 614 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 STKLD1Q8NE28 680 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 GPR152Q8TDT2 470 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 CLEC4CQ8WTT0 213 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 RFFLQ8WZ73 363 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 FBXO32Q969P5 355 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 PABPC5Q96DU9 382 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 PIWIL1Q96J94 861 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 ZNF512Q96ME7 567 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 FAM161BQ96MY7 647 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 ZNF830Q96NB3 372 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 GUCD1Q96NT3 240 aa13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 CDX2Q99626 313 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC12-218ENST00000479897 IL21Q9HBE4 155 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms