RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 NOD2Q9HC29 1040 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 ADAM29Q9UKF5 820 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 TBX20Q9UMR3 447 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 MRPS17Q9Y2R5 130 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 FANCAO15360 1455 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 KDM5BQ9UGL1 1544 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 PNMA6EA0A0J9YXQ4 647 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 FAM90A20PA6NIJ5 464 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 POLRMTO00411 1230 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 CCNT2O60583 730 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 RPP40O75818 363 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 FCER1AP12319 257 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 ABCD3P28288 659 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 KCNC1P48547 511 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 CLNS1AP54105 237 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 GALNT2Q10471 571 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 NFYCQ13952 458 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 RPS6KA2Q15349 733 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 ZMAT1Q5H9K5 638 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 C1QTNF12Q5T7M4 302 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 SLC30A10Q6XR72 485 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 TMEFF1Q8IYR6 380 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 TBC1D22AQ8WUA7 517 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 PPP2R3CQ969Q6 453 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 RNF125Q96EQ8 232 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 TMEM168Q9H0V1 697 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 EPC1Q9H2F5 836 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 AGO3Q9H9G7 860 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 GCM1Q9NP62 436 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 VPS51Q9UID3 782 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 SHOC2Q9UQ13 582 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 CDYLQ9Y232 598 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 UACAQ9BZF9 1416 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 WDR7Q9Y4E6 1490 aa8.26□□□□□ -1.09
GAPVD1-217ENST00000479511 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 TEX51A0A1B0GUA7 166 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 BTBD11A6QL63 1104 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 PLOD3O60568 738 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 SRGAP2O75044 1071 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 CSF1P09603 554 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 KCNA3P22001 575 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 SERPINA4P29622 427 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 NTSR1P30989 418 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 MAGEA10P43363 369 aaPredicted RBP8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 DGKEP52429 567 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 TMEM132EQ6IEE7 984 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 TAF2Q6P1X5 1199 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 GPRIN1Q7Z2K8 1008 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 ZFPM1Q8IX07 1006 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 GALNT4Q8N4A0 578 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 DNAJB14Q8TBM8 379 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 TFAP2CQ92754 450 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 MCRS1Q96EZ8 462 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 SMOC2Q9H3U7 446 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 NSMCE4AQ9NXX6 385 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 NKIRAS2Q9NYR9 191 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 TBC1D29Q9UFV1 150 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 HSF4Q9ULV5 492 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 TTC37Q6PGP7 1564 aa8.25□□□□□ -1.09
GAPVD1-217ENST00000479511 KIF27Q86VH2 1401 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 VWA3AA6NCI4 1184 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 ZNF503-AS2A6NEH8 195 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 KIF28PB7ZC32 967 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 MATN2O00339 956 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 ZSCAN9O15535 394 aaPredicted RBP8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 RGS10O43665 173 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 TMEM63AO94886 807 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 ATXN1LP0C7T5 689 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 HGFP14210 728 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 MAPK4P31152 587 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 CCR9P51686 369 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 RBM5P52756 815 aaKnown RBP eCLIP8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 TERF1P54274 439 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 DLG4P78352 724 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 MYO1EQ12965 1108 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 PDCLQ13371 301 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 RIN1Q13671 783 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 ANKRD1Q15327 319 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 FAM133BQ5BKY9 247 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 SPECC1Q5M775 1068 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 ZMYM1Q5SVZ6 1142 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 TAPT1Q6NXT6 567 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 B4GALNT4Q76KP1 1039 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 R3HCC1LQ7Z5L2 792 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 KLHL36Q8N4N3 616 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 PSD4Q8NDX1 1056 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 KCNG4Q8TDN1 519 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 BORCS6Q96GS4 357 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 DIRC2Q96SL1 478 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 MECRQ9BV79 373 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 CXorf36Q9H7Y0 433 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 KRT84Q9NSB2 600 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 NDUFAF4Q9P032 175 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 ZDHHC9Q9Y397 364 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 NR2E1Q9Y466 385 aa8.24□□□□□ -1.09
GAPVD1-217ENST00000479511 SYNDIG1LA6NDD5 238 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 AGPSO00116 658 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 CD3EAPO15446 510 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms