RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 APC2O95996 2303 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 ATXN2Q99700 1313 aaKnown RBP7.1□□□□□ -1.27
VCP-205ENST00000479300 HELZP42694 1942 aaKnown RBP7.1□□□□□ -1.27
VCP-205ENST00000479300 PLXND1Q9Y4D7 1925 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 FAM221BA6H8Z2 402 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 GOLGA8IPA6NC78 632 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 C2orf78A6NCI8 922 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 GOLGA8JA6NMD2 632 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 SMTNL1A8MU46 457 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 TISP43B9A030 160 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 HCRTO43612 131 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 PRPF6O94906 941 aaKnown RBP7.1□□□□□ -1.27
VCP-205ENST00000479300 ZIC2O95409 532 aaPredicted RBP7.1□□□□□ -1.27
VCP-205ENST00000479300 F13A1P00488 732 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 ITGB3P05106 788 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 AVPR1AP37288 418 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 P2RY2P41231 377 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 MAPK8P45983 427 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 DHPSP49366 369 aaPredicted RBP7.1□□□□□ -1.27
VCP-205ENST00000479300 SEC13P55735 322 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 WNT7BP56706 349 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 RPL10AP62906 217 aaKnown RBP7.1□□□□□ -1.27
VCP-205ENST00000479300 SIM1P81133 766 aaPredicted RBP7.1□□□□□ -1.27
VCP-205ENST00000479300 SEMA3BQ13214 749 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 ZNF268Q14587 947 aaPredicted RBP7.1□□□□□ -1.27
VCP-205ENST00000479300 PDGFRLQ15198 375 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 TERF2Q15554 542 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 NFE2Q16621 373 aaPredicted RBP7.1□□□□□ -1.27
VCP-205ENST00000479300 FOXD4L6Q3SYB3 417 aaPredicted RBP7.1□□□□□ -1.27
VCP-205ENST00000479300 FBXO43Q4G163 708 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 C2orf27AQ580R0 203 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 TRIM61Q5EBN2 209 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 C19orf48Q6RUI8 117 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 FOXD4L3Q6VB84 417 aaPredicted RBP7.1□□□□□ -1.27
VCP-205ENST00000479300 ARMCX6Q7L4S7 300 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 HS2ST1Q7LGA3 356 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 BRSK2Q8IWQ3 736 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 EFCAB13Q8IY85 973 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 KRT222Q8N1A0 295 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 TMEM86AQ8N2M4 240 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 CHCHD4Q8N4Q1 142 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 CCDC33Q8N5R6 958 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 LRRC52Q8N7C0 313 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 TSTD1Q8NFU3 115 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 OR2I1PQ8NGU4 316 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 OSCP1Q8WVF1 389 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 PIGKQ92643 395 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 CD101Q93033 1021 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 ACDQ96AP0 544 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 CNOT6LQ96LI5 555 aaKnown RBP7.1□□□□□ -1.27
VCP-205ENST00000479300 DCBLD2Q96PD2 775 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 FIZ1Q96SL8 496 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 PKMYT1Q99640 499 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 REPIN1Q9BWE0 567 aaKnown RBP7.1□□□□□ -1.27
VCP-205ENST00000479300 PCIF1Q9H4Z3 704 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 KIF9Q9HAQ2 790 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 ZDHHC4Q9NPG8 344 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 DUS2Q9NX74 493 aaKnown RBP7.1□□□□□ -1.27
VCP-205ENST00000479300 GCNT4Q9P109 453 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 USP25Q9UHP3 1055 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 EVLQ9UI08 416 aaPredicted RBP7.1□□□□□ -1.27
VCP-205ENST00000479300 ZMYM5Q9UJ78 669 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 GPSM3Q9Y4H4 160 aa7.1□□□□□ -1.27
VCP-205ENST00000479300 KALRNO60229 2985 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 PI4KAP42356 2102 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 UBE4BO95155 1302 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 GOLGA6L6A8MZA4 724 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 SGK1O00141 431 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 EIF3DO15371 548 aaKnown RBP eCLIP7.09□□□□□ -1.27
VCP-205ENST00000479300 POLR2DO15514 142 aaKnown RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 ADAM23O75077 832 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 PHACTR2O75167 634 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 PRPF40AO75400 957 aaKnown RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 NOL4O94818 638 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 ENGP17813 658 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 TRIM21P19474 475 aaKnown RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 CYP2F1P24903 491 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 BRD2P25440 801 aaKnown RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 DDX6P26196 483 aaKnown RBP eCLIP7.09□□□□□ -1.27
VCP-205ENST00000479300 PCSK1P29120 753 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 POLR2BP30876 1174 aaKnown RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 LHX1P48742 406 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 SNRPFP62306 86 aaKnown RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 FAM160A1Q05DH4 1040 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 PSMD2Q13200 908 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 CRY1Q16526 586 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 DDR2Q16832 855 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 DUOXA2Q1HG44 320 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 MAP7D1Q3KQU3 841 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 USP39Q53GS9 565 aaKnown RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 FAM26FQ5R3K3 315 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 EMC10Q5UCC4 262 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 PEAR1Q5VY43 1037 aaPredicted RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 CRELD2Q6UXH1 353 aaPredicted RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 RAB44Q7Z6P3 723 aaPredicted RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 C12orf40Q86WS4 652 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 PROSER1Q86XN7 944 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 SPATA2LQ8IUW3 424 aaPredicted RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 TMEFF1Q8IYR6 380 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms