RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 DSC1Q08554 894 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 KLHL30Q0D2K2 578 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 INCA1Q0VD86 236 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 ASTE1Q2TB18 679 aaPredicted RBP7.09□□□□□ -1.27
USP48-208ENST00000479177 WDR72Q3MJ13 1102 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 SV2CQ496J9 727 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP48-208ENST00000479177 TOGARAM2Q6ZUX3 1019 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 ZNF571Q7Z3V5 609 aaPredicted RBP7.09□□□□□ -1.27
USP48-208ENST00000479177 LIMS2Q7Z4I7 341 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 ZSCAN30Q86W11 494 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 RBBP8NLQ8NC74 664 aaPredicted RBP7.09□□□□□ -1.27
USP48-208ENST00000479177 C3orf58Q8NDZ4 430 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 RSPH1Q8WYR4 309 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 UROC1Q96N76 676 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 CASD1Q96PB1 797 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 CLEC4MQ9H2X3 399 aaPredicted RBP7.09□□□□□ -1.27
USP48-208ENST00000479177 FAM124BQ9H5Z6 455 aaPredicted RBP7.09□□□□□ -1.27
USP48-208ENST00000479177 ZNF576Q9H609 170 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 HAUS4Q9H6D7 363 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 NHEJ1Q9H9Q4 299 aaPredicted RBP7.09□□□□□ -1.27
USP48-208ENST00000479177 CYP3A43Q9HB55 503 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 OSGEPQ9NPF4 335 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 IL23AQ9NPF7 189 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 CISHQ9NSE2 258 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 TBC1D13Q9NVG8 400 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 HMGXB4Q9UGU5 601 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 NOCTQ9UK39 431 aaKnown RBP7.09□□□□□ -1.27
USP48-208ENST00000479177 NENFQ9UMX5 172 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 R3HCC1Q9Y3T6 440 aaKnown RBP7.09□□□□□ -1.27
USP48-208ENST00000479177 PCDHB7Q9Y5E2 793 aa7.09□□□□□ -1.27
USP48-208ENST00000479177 BZW2Q9Y6E2 419 aaKnown RBP7.09□□□□□ -1.27
USP48-208ENST00000479177 ARID1BQ8NFD5 2236 aaPredicted RBP7.08□□□□□ -1.28
USP48-208ENST00000479177 EIF3CLB5ME19 914 aaKnown RBP7.08□□□□□ -1.28
USP48-208ENST00000479177 CYP26A1O43174 497 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 CILPO75339 1184 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 BAIAP3O94812 1187 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 NDUFA10O95299 355 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 MED26O95402 600 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 ECEL1O95672 775 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 WEE2P0C1S8 567 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 CCDC172P0C7W6 258 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 ACRP10323 421 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 KRT5P13647 590 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 GLB1P16278 677 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 CD58P19256 250 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 IGFBP6P24592 240 aaPredicted RBP7.08□□□□□ -1.28
USP48-208ENST00000479177 CYLC1P35663 651 aaPredicted RBP7.08□□□□□ -1.28
USP48-208ENST00000479177 USP8P40818 1118 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 PDE6CP51160 858 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 CLCNKBP51801 687 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 LILRA4P59901 499 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 WDR5P61964 334 aaKnown RBP7.08□□□□□ -1.28
USP48-208ENST00000479177 DEFB103AP81534 67 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 GSTM4Q03013 218 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 FPGSQ05932 587 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 PPIGQ13427 754 aaKnown RBP eCLIP7.08□□□□□ -1.28
USP48-208ENST00000479177 UPP1Q16831 310 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 TMEM270Q6UE05 265 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 NXPE4Q6UWF7 544 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 CD300LGQ6UXG3 332 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 PRR23CQ6ZRP0 262 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 NOP9Q86U38 636 aaKnown RBP7.08□□□□□ -1.28
USP48-208ENST00000479177 SLC47A2Q86VL8 602 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 ZNF280BQ86YH2 543 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 COLGALT2Q8IYK4 626 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 CCDC170Q8IYT3 715 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 RPUSD2Q8IZ73 545 aaKnown RBP7.08□□□□□ -1.28
USP48-208ENST00000479177 ABI1Q8IZP0 508 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 ACRBPQ8NEB7 543 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 KIAA1524Q8TCG1 905 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 SLC20A1Q8WUM9 679 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 KBTBD7Q8WVZ9 684 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 BADQ92934 168 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 UBL7Q96S82 380 aaPredicted RBP7.08□□□□□ -1.28
USP48-208ENST00000479177 EIF3CQ99613 913 aaKnown RBP7.08□□□□□ -1.28
USP48-208ENST00000479177 PAAF1Q9BRP4 392 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 DESI2Q9BSY9 194 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 HTATIP2Q9BUP3 242 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 MRPL9Q9BYD2 267 aaKnown RBP7.08□□□□□ -1.28
USP48-208ENST00000479177 ELOVL4Q9GZR5 314 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 RC3H2Q9HBD1 1191 aaKnown RBP7.08□□□□□ -1.28
USP48-208ENST00000479177 SPTLC3Q9NUV7 552 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 GDAP2Q9NXN4 497 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 PRKAG2Q9UGJ0 569 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 REXO2Q9Y3B8 237 aaKnown RBP7.08□□□□□ -1.28
USP48-208ENST00000479177 PCDHB4Q9Y5E5 795 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 SNX9Q9Y5X1 595 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 KIAA1671Q9BY89 1806 aa7.08□□□□□ -1.28
USP48-208ENST00000479177 VWA8A3KMH1 1905 aa7.07□□□□□ -1.28
USP48-208ENST00000479177 A0A087X0T9 212 aa7.07□□□□□ -1.28
USP48-208ENST00000479177 TMEM238LA0A1B0GVL6 79 aa7.07□□□□□ -1.28
USP48-208ENST00000479177 TBKBP1A7MCY6 615 aa7.07□□□□□ -1.28
USP48-208ENST00000479177 KPNA7A9QM74 516 aa7.07□□□□□ -1.28
USP48-208ENST00000479177 F8W810 466 aa7.07□□□□□ -1.28
USP48-208ENST00000479177 TMEM189-UBE2V1I3L0A0 370 aa7.07□□□□□ -1.28
USP48-208ENST00000479177 DDX3XO00571 662 aaKnown RBP eCLIP7.07□□□□□ -1.28
USP48-208ENST00000479177 ZNF263O14978 683 aa7.07□□□□□ -1.28
USP48-208ENST00000479177 AKR1B10O60218 316 aa7.07□□□□□ -1.28
USP48-208ENST00000479177 TACC1O75410 805 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms