RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 PARP9Q8IXQ6 854 aa28.78■■■□□ 2.2
CHKB-208ENST00000479003 ZBED8Q8IZ13 594 aa28.78■■■□□ 2.2
CHKB-208ENST00000479003 NCAPGQ9BPX3 1015 aa28.78■■■□□ 2.2
CHKB-208ENST00000479003 PLCD4Q9BRC7 762 aa28.78■■■□□ 2.2
CHKB-208ENST00000479003 HMX1Q9NP08 348 aaPredicted RBP28.78■■■□□ 2.2
CHKB-208ENST00000479003 METTL5Q9NRN9 209 aaKnown RBP28.78■■■□□ 2.2
CHKB-208ENST00000479003 PRKAG3Q9UGI9 489 aa28.78■■■□□ 2.2
CHKB-208ENST00000479003 ARL2BPQ9Y2Y0 163 aa28.78■■■□□ 2.2
CHKB-208ENST00000479003 CST8O60676 142 aa28.77■■■□□ 2.2
CHKB-208ENST00000479003 ERBB2P04626 1255 aa28.77■■■□□ 2.2
CHKB-208ENST00000479003 ACLYP53396 1101 aa28.77■■■□□ 2.2
CHKB-208ENST00000479003 SLC18A1P54219 525 aa28.77■■■□□ 2.2
CHKB-208ENST00000479003 PTPN11Q06124 597 aaPredicted RBP28.77■■■□□ 2.2
CHKB-208ENST00000479003 RASA2Q15283 850 aa28.77■■■□□ 2.2
CHKB-208ENST00000479003 PCBP1Q15365 356 aaKnown RBP eCLIP28.77■■■□□ 2.23e-6■■■■■ 28.8
CHKB-208ENST00000479003 SLC10A6Q3KNW5 377 aa28.77■■■□□ 2.2
CHKB-208ENST00000479003 SESTD1Q86VW0 696 aa28.77■■■□□ 2.2
CHKB-208ENST00000479003 TMEM130Q8N3G9 435 aa28.77■■■□□ 2.2
CHKB-208ENST00000479003 VPS37BQ9H9H4 285 aa28.77■■■□□ 2.2
CHKB-208ENST00000479003 PRPF4O43172 522 aaKnown RBP eCLIP28.76■■■□□ 2.25e-7■■□□□ 13.1
CHKB-208ENST00000479003 PRMT2P55345 433 aa28.76■■■□□ 2.2
CHKB-208ENST00000479003 DYNLT1P63172 113 aa28.76■■■□□ 2.2
CHKB-208ENST00000479003 MRPS6P82932 125 aaKnown RBP28.76■■■□□ 2.2
CHKB-208ENST00000479003 IL9RQ01113 521 aa28.76■■■□□ 2.2
CHKB-208ENST00000479003 ADCY1Q08828 1119 aa28.76■■■□□ 2.2
CHKB-208ENST00000479003 PDIA2Q13087 525 aaKnown RBP28.76■■■□□ 2.2
CHKB-208ENST00000479003 NOTUMQ6P988 496 aa28.76■■■□□ 2.2
CHKB-208ENST00000479003 SLC27A1Q6PCB7 646 aa28.76■■■□□ 2.2
CHKB-208ENST00000479003 CXorf38Q8TB03 319 aa28.76■■■□□ 2.2
CHKB-208ENST00000479003 SH3TC2Q8TF17 1288 aa28.76■■■□□ 2.2
CHKB-208ENST00000479003 TWNKQ96RR1 684 aa28.76■■■□□ 2.2
CHKB-208ENST00000479003 SMYD3Q9H7B4 428 aa28.76■■■□□ 2.2
CHKB-208ENST00000479003 PIN4Q9Y237 131 aaKnown RBP28.76■■■□□ 2.2
CHKB-208ENST00000479003 POC1B-GALNT4F8VUJ3 575 aa28.76■■■□□ 2.19
CHKB-208ENST00000479003 CILPO75339 1184 aa28.76■■■□□ 2.19
CHKB-208ENST00000479003 TAC1P20366 129 aa28.76■■■□□ 2.19
CHKB-208ENST00000479003 WDR4P57081 412 aaKnown RBP28.76■■■□□ 2.19
CHKB-208ENST00000479003 GALNTL6Q49A17 601 aa28.76■■■□□ 2.19
CHKB-208ENST00000479003 FAM133BQ5BKY9 247 aaKnown RBP28.76■■■□□ 2.19
CHKB-208ENST00000479003 KCNT1Q5JUK3 1230 aa28.76■■■□□ 2.19
CHKB-208ENST00000479003 HP1BP3Q5SSJ5 553 aaPredicted RBP28.76■■■□□ 2.19
CHKB-208ENST00000479003 EMC1Q8N766 993 aa28.76■■■□□ 2.19
CHKB-208ENST00000479003 MYCBPQ99417 103 aaPredicted RBP28.76■■■□□ 2.19
CHKB-208ENST00000479003 VRTNQ9H8Y1 702 aa28.76■■■□□ 2.19
CHKB-208ENST00000479003 SENP1Q9P0U3 644 aa28.76■■■□□ 2.19
CHKB-208ENST00000479003 SAE1Q9UBE0 346 aaPredicted RBP28.76■■■□□ 2.19
CHKB-208ENST00000479003 SLC24A2Q9UI40 661 aa28.76■■■□□ 2.19
CHKB-208ENST00000479003 CDY2AQ9Y6F7 541 aa28.76■■■□□ 2.19
CHKB-208ENST00000479003 CTSHP09668 335 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 GABRB2P47870 512 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 MYO1EQ12965 1108 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 DCAF4L1Q3SXM0 396 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 JADE1Q6IE81 842 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 PPIL6Q8IXY8 311 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 ELOVL4Q9GZR5 314 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 SYNCQ9H7C4 482 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 FRMPD3Q5JV73 1810 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 CHUKO15111 745 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 MICAL2O94851 1124 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 UBOX5O94941 541 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 ASMTLO95671 621 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 ITGB3P05106 788 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 ATICP31939 592 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 FOXN2P32314 431 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 GDF10P55107 478 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 ORC1Q13415 861 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 ITGA7Q13683 1181 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 ACAP1Q15027 740 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 MTFR1Q15390 333 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 HIF1AQ16665 826 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 CGB2Q6NT52 195 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 DENND1AQ8TEH3 1009 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 GRAMD1AQ96CP6 724 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 MCRS1Q96EZ8 462 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 TMEM176AQ96HP8 235 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 TRABDQ9H4I3 376 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 CYP3A43Q9HB55 503 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 HMGXB4Q9UGU5 601 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 HES2Q9Y543 173 aa28.75■■■□□ 2.19
CHKB-208ENST00000479003 GRM5P41594 1212 aa28.74■■■□□ 2.19
CHKB-208ENST00000479003 CTCFP49711 727 aaPredicted RBP28.74■■■□□ 2.19
CHKB-208ENST00000479003 ZKSCAN8Q15776 578 aaPredicted RBP28.74■■■□□ 2.19
CHKB-208ENST00000479003 SNCBQ16143 134 aa28.74■■■□□ 2.19
CHKB-208ENST00000479003 GBP7Q8N8V2 638 aaPredicted RBP28.74■■■□□ 2.19
CHKB-208ENST00000479003 CCDC63Q8NA47 563 aa28.74■■■□□ 2.19
CHKB-208ENST00000479003 CMASQ8NFW8 434 aaPredicted RBP28.74■■■□□ 2.19
CHKB-208ENST00000479003 CPT1BQ92523 772 aa28.74■■■□□ 2.19
CHKB-208ENST00000479003 ACAP3Q96P50 834 aa28.74■■■□□ 2.19
CHKB-208ENST00000479003 WDR3Q9UNX4 943 aaKnown RBP eCLIP28.74■■■□□ 2.19
CHKB-208ENST00000479003 CITO14578 2027 aa28.74■■■□□ 2.19
CHKB-208ENST00000479003 CFAP73A6NFT4 308 aa28.73■■■□□ 2.19
CHKB-208ENST00000479003 MGRN1O60291 552 aa28.73■■■□□ 2.19
CHKB-208ENST00000479003 PKN2Q16513 984 aaKnown RBP28.73■■■□□ 2.19
CHKB-208ENST00000479003 KYAT1Q16773 422 aa28.73■■■□□ 2.19
CHKB-208ENST00000479003 FAM228AQ86W67 206 aa28.73■■■□□ 2.19
CHKB-208ENST00000479003 NAT8LQ8N9F0 302 aa28.73■■■□□ 2.19
CHKB-208ENST00000479003 CD48P09326 243 aa28.73■■■□□ 2.19
CHKB-208ENST00000479003 ELF3P78545 371 aaPredicted RBP28.73■■■□□ 2.19
CHKB-208ENST00000479003 EFHC2Q5JST6 749 aa28.73■■■□□ 2.19
CHKB-208ENST00000479003 BEGAINQ9BUH8 593 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms