RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 USP17L7P0C7H9 530 aa12.52□□□□□ -0.41
PCCB-214ENST00000478469 AVPR1AP37288 418 aa12.52□□□□□ -0.41
PCCB-214ENST00000478469 KPNA1P52294 538 aaPredicted RBP12.52□□□□□ -0.41
PCCB-214ENST00000478469 SF3A3Q12874 501 aaKnown RBP eCLIP12.52□□□□□ -0.41
PCCB-214ENST00000478469 ZNF618Q5T7W0 954 aa12.52□□□□□ -0.41
PCCB-214ENST00000478469 ASIC4Q96FT7 647 aa12.52□□□□□ -0.41
PCCB-214ENST00000478469 SNX27Q96L92 541 aa12.52□□□□□ -0.41
PCCB-214ENST00000478469 HGSO14964 777 aaPredicted RBP12.51□□□□□ -0.41
PCCB-214ENST00000478469 PRAMEP78395 509 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 IL9RQ01113 521 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 IRF5Q13568 498 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 KLHL38Q2WGJ6 581 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 SPOCD1Q6ZMY3 1216 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 PPM1NQ8N819 430 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 OR6P1Q8NGX9 317 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 BHMTQ93088 406 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 EMID1Q96A84 441 aaPredicted RBP12.51□□□□□ -0.41
PCCB-214ENST00000478469 TSEN34Q9BSV6 310 aaKnown RBP12.51□□□□□ -0.41
PCCB-214ENST00000478469 TLR10Q9BXR5 811 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 HSD3B7Q9H2F3 369 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 POPDC2Q9HBU9 364 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 TPX2Q9ULW0 747 aaKnown RBP12.51□□□□□ -0.41
PCCB-214ENST00000478469 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.51□□□□□ -0.41
PCCB-214ENST00000478469 TRIM66O15016 1216 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 NOL4O94818 638 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 ZNF177Q13360 481 aaPredicted RBP12.51□□□□□ -0.41
PCCB-214ENST00000478469 FAM187BQ17R55 369 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 DENND5BQ6ZUT9 1274 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 ACTRT1Q8TDG2 376 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 LRRC8CQ8TDW0 803 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 ATG4AQ8WYN0 398 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 CDK5RAP1Q96SZ6 601 aaKnown RBP12.51□□□□□ -0.41
PCCB-214ENST00000478469 MRPL45Q9BRJ2 306 aaKnown RBP12.51□□□□□ -0.41
PCCB-214ENST00000478469 NFKBIZQ9BYH8 718 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 COQ4Q9Y3A0 265 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 CCDC85CA6NKD9 419 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 SIGLEC16A6NMB1 481 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 F8VP50 259 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 STK25O00506 426 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 EOMESO95936 686 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 ZNF865P0CJ78 1059 aaPredicted RBP12.51□□□□□ -0.41
PCCB-214ENST00000478469 MYL4P12829 197 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 CYP3A5P20815 502 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 ST8SIA6P61647 398 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 CDH18Q13634 790 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 ANKRD20A3Q5VUR7 823 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 NT5DC3Q86UY8 548 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 FAM71DQ8N9W8 422 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 PXYLP1Q8TE99 480 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 RBM15Q96T37 977 aaKnown RBP eCLIP12.51□□□□□ -0.414e-6■■□□□ 13.6
PCCB-214ENST00000478469 COL24A1Q17RW2 1714 aa12.51□□□□□ -0.41
PCCB-214ENST00000478469 A0A087WUV0 522 aaPredicted RBP12.5□□□□□ -0.41
PCCB-214ENST00000478469 AP3B1O00203 1094 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 KPNA2P52292 529 aaKnown RBP12.5□□□□□ -0.41
PCCB-214ENST00000478469 MORN1Q5T089 497 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 SYCP2LQ5T4T6 812 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 ERMARDQ5T6L9 678 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 OTOP2Q7RTS6 562 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 FAM228AQ86W67 206 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 PHF13Q86YI8 300 aaPredicted RBP12.5□□□□□ -0.41
PCCB-214ENST00000478469 GIPC2Q8TF65 315 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 TFB1MQ8WVM0 346 aaKnown RBP12.5□□□□□ -0.41
PCCB-214ENST00000478469 FBXL18Q96ME1 805 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 SERPINB11Q96P15 392 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 OLA1Q9NTK5 396 aaKnown RBP12.5□□□□□ -0.41
PCCB-214ENST00000478469 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.5□□□□□ -0.41
PCCB-214ENST00000478469 PCDHGC5Q9Y5F6 944 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 SLC4A7Q9Y6M7 1214 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 SBF2Q86WG5 1849 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 ARHGAP42A6NI28 874 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 PSMD3O43242 534 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 MIPP30301 263 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 NOS2P35228 1153 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 RFC1P35251 1148 aaPredicted RBP12.5□□□□□ -0.41
PCCB-214ENST00000478469 OTUD4Q01804 1114 aaKnown RBP12.5□□□□□ -0.41
PCCB-214ENST00000478469 RABGAP1LQ5R372 815 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 ZNF449Q6P9G9 518 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 KDELC2Q7Z4H8 507 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 PALB2Q86YC2 1186 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 TAF1LQ8IZX4 1826 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 ADAM32Q8TC27 787 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 ACTL9Q8TC94 416 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 FRMD8P1Q9BZ68 369 aaPredicted RBP12.5□□□□□ -0.41
PCCB-214ENST00000478469 UNC93B1Q9H1C4 597 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 ARL5CA6NH57 179 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 CTCFP49711 727 aaPredicted RBP12.5□□□□□ -0.41
PCCB-214ENST00000478469 LILRA4P59901 499 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 PPP1R26Q5T8A7 1209 aaPredicted RBP12.5□□□□□ -0.41
PCCB-214ENST00000478469 CDCA2Q69YH5 1023 aaPredicted RBP12.5□□□□□ -0.41
PCCB-214ENST00000478469 C4orf22Q6V702 233 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 MYLPFQ96A32 169 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 SCLYQ96I15 445 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 FOXP3Q9BZS1 431 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 LAMB2P55268 1798 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 HMGB1P1B2RPK0 211 aaPredicted RBP12.5□□□□□ -0.41
PCCB-214ENST00000478469 F8W8V4 182 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 H0Y626 953 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 CILPO75339 1184 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 CTNNB1P35222 781 aa12.5□□□□□ -0.41
PCCB-214ENST00000478469 TBX4P57082 545 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms